Gene : orange1.1g038639m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR11061:SF30 - TRNA (URACIL(54)-C(5))-METHYLTRANSFERASE Genomic Order:  22
Name:  ? orange1.1g038639m.g Secondary Identifier:  ? PAC:18103746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g038639m.g 0.5kb upstream 0.5kb upstream 3776 true scaffold00074: 133979-137754 Citrus sinensis
orange1.1g038639m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00074: 133979-134478 Citrus sinensis
orange1.1g038639m.g 0.5kb downstream 0.5kb downstream 3776 true scaffold00074: 134479-138254 Citrus sinensis
orange1.1g038639m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00074: 137755-138254 Citrus sinensis
orange1.1g038639m.g 1.0kb upstream 1.0kb upstream 4276 true scaffold00074: 133479-137754 Citrus sinensis
orange1.1g038639m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00074: 133479-134478 Citrus sinensis
orange1.1g038639m.g 1.0kb downstream 1.0kb downstream 4276 true scaffold00074: 134479-138754 Citrus sinensis
orange1.1g038639m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00074: 137755-138754 Citrus sinensis
orange1.1g038639m.g 2.0kb upstream 2.0kb upstream 5276 true scaffold00074: 132479-137754 Citrus sinensis
orange1.1g038639m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00074: 132479-134478 Citrus sinensis
orange1.1g038639m.g 2.0kb downstream 2.0kb downstream 5276 true scaffold00074: 134479-139754 Citrus sinensis
orange1.1g038639m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00074: 137755-139754 Citrus sinensis
orange1.1g038639m.g 5.0kb upstream 5.0kb upstream 8276 true scaffold00074: 129479-137754 Citrus sinensis
orange1.1g038639m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00074: 129479-134478 Citrus sinensis
orange1.1g038639m.g 5.0kb downstream 5.0kb downstream 8276 true scaffold00074: 134479-142754 Citrus sinensis
orange1.1g038639m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00074: 137755-142754 Citrus sinensis
orange1.1g038639m.g 10.0kb upstream 10.0kb upstream 13276 true scaffold00074: 124479-137754 Citrus sinensis
orange1.1g038639m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00074: 124479-134478 Citrus sinensis
orange1.1g038639m.g 10.0kb downstream 10.0kb downstream 13276 true scaffold00074: 134479-147754 Citrus sinensis
orange1.1g038639m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00074: 137755-147754 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121529330 5273 Angiosperm Singleton cluster - no MSA
124328929 5266 SBM Singleton cluster - no MSA
124174184 5268 Malvidae Singleton cluster - no MSA
123896719 5270 Rosid Singleton cluster - no MSA
123478578 5271 Pentapetalae Singleton cluster - no MSA
122513830 5272 Eudicot Singleton cluster - no MSA
120802092 5274 Embryophyte Singleton cluster - no MSA
122843646 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain