Gene : orange1.1g009524m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR13301:SF60 - CELLULOSE SYNTHASE-LIKE PROTEIN E1 Genomic Order:  46
Name:  ? orange1.1g009524m.g Secondary Identifier:  ? PAC:18114138
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1001 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009524m.g 0.5kb upstream 0.5kb upstream 2785 true scaffold00070: 266711-269495 Citrus sinensis
orange1.1g009524m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00070: 268996-269495 Citrus sinensis
orange1.1g009524m.g 0.5kb downstream 0.5kb downstream 2785 true scaffold00070: 266211-268995 Citrus sinensis
orange1.1g009524m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00070: 266211-266710 Citrus sinensis
orange1.1g009524m.g 1.0kb upstream 1.0kb upstream 3285 true scaffold00070: 266711-269995 Citrus sinensis
orange1.1g009524m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00070: 268996-269995 Citrus sinensis
orange1.1g009524m.g 1.0kb downstream 1.0kb downstream 3285 true scaffold00070: 265711-268995 Citrus sinensis
orange1.1g009524m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00070: 265711-266710 Citrus sinensis
orange1.1g009524m.g 2.0kb upstream 2.0kb upstream 4285 true scaffold00070: 266711-270995 Citrus sinensis
orange1.1g009524m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00070: 268996-270995 Citrus sinensis
orange1.1g009524m.g 2.0kb downstream 2.0kb downstream 4285 true scaffold00070: 264711-268995 Citrus sinensis
orange1.1g009524m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00070: 264711-266710 Citrus sinensis
orange1.1g009524m.g 5.0kb upstream 5.0kb upstream 7285 true scaffold00070: 266711-273995 Citrus sinensis
orange1.1g009524m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00070: 268996-273995 Citrus sinensis
orange1.1g009524m.g 5.0kb downstream 5.0kb downstream 7285 true scaffold00070: 261711-268995 Citrus sinensis
orange1.1g009524m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00070: 261711-266710 Citrus sinensis
orange1.1g009524m.g 10.0kb upstream 10.0kb upstream 12285 true scaffold00070: 266711-278995 Citrus sinensis
orange1.1g009524m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00070: 268996-278995 Citrus sinensis
orange1.1g009524m.g 10.0kb downstream 10.0kb downstream 12285 true scaffold00070: 256711-268995 Citrus sinensis
orange1.1g009524m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00070: 256711-266710 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339465 5266 SBM View MSA
124237130 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain