Gene : orange1.1g005037m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR13301:SF60 - CELLULOSE SYNTHASE-LIKE PROTEIN E1 Genomic Order:  44
Name:  ? orange1.1g005037m.g Secondary Identifier:  ? PAC:18114066
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1001 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g005037m.g 0.5kb upstream 0.5kb upstream 4090 true scaffold00070: 258837-262926 Citrus sinensis
orange1.1g005037m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00070: 262427-262926 Citrus sinensis
orange1.1g005037m.g 0.5kb downstream 0.5kb downstream 4090 true scaffold00070: 258337-262426 Citrus sinensis
orange1.1g005037m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00070: 258337-258836 Citrus sinensis
orange1.1g005037m.g 1.0kb upstream 1.0kb upstream 4590 true scaffold00070: 258837-263426 Citrus sinensis
orange1.1g005037m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00070: 262427-263426 Citrus sinensis
orange1.1g005037m.g 1.0kb downstream 1.0kb downstream 4590 true scaffold00070: 257837-262426 Citrus sinensis
orange1.1g005037m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00070: 257837-258836 Citrus sinensis
orange1.1g005037m.g 2.0kb upstream 2.0kb upstream 5590 true scaffold00070: 258837-264426 Citrus sinensis
orange1.1g005037m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00070: 262427-264426 Citrus sinensis
orange1.1g005037m.g 2.0kb downstream 2.0kb downstream 5590 true scaffold00070: 256837-262426 Citrus sinensis
orange1.1g005037m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00070: 256837-258836 Citrus sinensis
orange1.1g005037m.g 5.0kb upstream 5.0kb upstream 8590 true scaffold00070: 258837-267426 Citrus sinensis
orange1.1g005037m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00070: 262427-267426 Citrus sinensis
orange1.1g005037m.g 5.0kb downstream 5.0kb downstream 8590 true scaffold00070: 253837-262426 Citrus sinensis
orange1.1g005037m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00070: 253837-258836 Citrus sinensis
orange1.1g005037m.g 10.0kb upstream 10.0kb upstream 13590 true scaffold00070: 258837-272426 Citrus sinensis
orange1.1g005037m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00070: 262427-272426 Citrus sinensis
orange1.1g005037m.g 10.0kb downstream 10.0kb downstream 13590 true scaffold00070: 248837-262426 Citrus sinensis
orange1.1g005037m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00070: 248837-258836 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124333937 5266 SBM View MSA
124178996 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain