Gene : orange1.1g025205m.g C. sinensis v1.1
Defline:  (1 of 4) PF04949 - Transcriptional activator (Transcrip_act) Genomic Order:  82
Name:  ? orange1.1g025205m.g Secondary Identifier:  ? PAC:18101129
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g025205m.g 0.5kb upstream 0.5kb upstream 4090 true scaffold00062: 573251-577340 Citrus sinensis
orange1.1g025205m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00062: 576841-577340 Citrus sinensis
orange1.1g025205m.g 0.5kb downstream 0.5kb downstream 4090 true scaffold00062: 572751-576840 Citrus sinensis
orange1.1g025205m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00062: 572751-573250 Citrus sinensis
orange1.1g025205m.g 1.0kb upstream 1.0kb upstream 4590 true scaffold00062: 573251-577840 Citrus sinensis
orange1.1g025205m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00062: 576841-577840 Citrus sinensis
orange1.1g025205m.g 1.0kb downstream 1.0kb downstream 4590 true scaffold00062: 572251-576840 Citrus sinensis
orange1.1g025205m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00062: 572251-573250 Citrus sinensis
orange1.1g025205m.g 2.0kb upstream 2.0kb upstream 5590 true scaffold00062: 573251-578840 Citrus sinensis
orange1.1g025205m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00062: 576841-578840 Citrus sinensis
orange1.1g025205m.g 2.0kb downstream 2.0kb downstream 5590 true scaffold00062: 571251-576840 Citrus sinensis
orange1.1g025205m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00062: 571251-573250 Citrus sinensis
orange1.1g025205m.g 5.0kb upstream 5.0kb upstream 8590 true scaffold00062: 573251-581840 Citrus sinensis
orange1.1g025205m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00062: 576841-581840 Citrus sinensis
orange1.1g025205m.g 5.0kb downstream 5.0kb downstream 8590 true scaffold00062: 568251-576840 Citrus sinensis
orange1.1g025205m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00062: 568251-573250 Citrus sinensis
orange1.1g025205m.g 10.0kb upstream 10.0kb upstream 13590 true scaffold00062: 573251-586840 Citrus sinensis
orange1.1g025205m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00062: 576841-586840 Citrus sinensis
orange1.1g025205m.g 10.0kb downstream 10.0kb downstream 13590 true scaffold00062: 563251-576840 Citrus sinensis
orange1.1g025205m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00062: 563251-573250 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344946 5266 SBM View MSA
124236865 5268 Malvidae View MSA
124069081 5270 Rosid View MSA
123736919 5271 Pentapetalae View MSA
122788621 5272 Eudicot View MSA
122047565 5273 Angiosperm View MSA
121345240 5274 Embryophyte View MSA
123426204 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain