Gene : orange1.1g003544m.g C. sinensis v1.1
Defline:  (1 of 7) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  22
Name:  ? orange1.1g003544m.g Secondary Identifier:  ? PAC:18123276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g003544m.g 0.5kb upstream 0.5kb upstream 8925 true scaffold00091: 155888-164812 Citrus sinensis
orange1.1g003544m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00091: 164313-164812 Citrus sinensis
orange1.1g003544m.g 0.5kb downstream 0.5kb downstream 8925 true scaffold00091: 155388-164312 Citrus sinensis
orange1.1g003544m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00091: 155388-155887 Citrus sinensis
orange1.1g003544m.g 1.0kb upstream 1.0kb upstream 9425 true scaffold00091: 155888-165312 Citrus sinensis
orange1.1g003544m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00091: 164313-165312 Citrus sinensis
orange1.1g003544m.g 1.0kb downstream 1.0kb downstream 9425 true scaffold00091: 154888-164312 Citrus sinensis
orange1.1g003544m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00091: 154888-155887 Citrus sinensis
orange1.1g003544m.g 2.0kb upstream 2.0kb upstream 10425 true scaffold00091: 155888-166312 Citrus sinensis
orange1.1g003544m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00091: 164313-166312 Citrus sinensis
orange1.1g003544m.g 2.0kb downstream 2.0kb downstream 10425 true scaffold00091: 153888-164312 Citrus sinensis
orange1.1g003544m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00091: 153888-155887 Citrus sinensis
orange1.1g003544m.g 5.0kb upstream 5.0kb upstream 13425 true scaffold00091: 155888-169312 Citrus sinensis
orange1.1g003544m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00091: 164313-169312 Citrus sinensis
orange1.1g003544m.g 5.0kb downstream 5.0kb downstream 13425 true scaffold00091: 150888-164312 Citrus sinensis
orange1.1g003544m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00091: 150888-155887 Citrus sinensis
orange1.1g003544m.g 10.0kb upstream 10.0kb upstream 18425 true scaffold00091: 155888-174312 Citrus sinensis
orange1.1g003544m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00091: 164313-174312 Citrus sinensis
orange1.1g003544m.g 10.0kb downstream 10.0kb downstream 18425 true scaffold00091: 145888-164312 Citrus sinensis
orange1.1g003544m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00091: 145888-155887 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344970 5266 SBM View MSA
124236944 5268 Malvidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain