Gene : orange1.1g017282m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11048:SF18 - CHLOROPHYLL SYNTHASE, CHLOROPLASTIC Genomic Order:  32
Name:  ? orange1.1g017282m.g Secondary Identifier:  ? PAC:18131657
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5064 Citrus sinensis pathologic  
Csinensis PWY-5068 Citrus sinensis pathologic  
Csinensis PWY-5086 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g017282m.g 0.5kb upstream 0.5kb upstream 5053 true scaffold00098: 263433-268485 Citrus sinensis
orange1.1g017282m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00098: 263433-263932 Citrus sinensis
orange1.1g017282m.g 0.5kb downstream 0.5kb downstream 5053 true scaffold00098: 263933-268985 Citrus sinensis
orange1.1g017282m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00098: 268486-268985 Citrus sinensis
orange1.1g017282m.g 1.0kb upstream 1.0kb upstream 5553 true scaffold00098: 262933-268485 Citrus sinensis
orange1.1g017282m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00098: 262933-263932 Citrus sinensis
orange1.1g017282m.g 1.0kb downstream 1.0kb downstream 5553 true scaffold00098: 263933-269485 Citrus sinensis
orange1.1g017282m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00098: 268486-269485 Citrus sinensis
orange1.1g017282m.g 2.0kb upstream 2.0kb upstream 6553 true scaffold00098: 261933-268485 Citrus sinensis
orange1.1g017282m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00098: 261933-263932 Citrus sinensis
orange1.1g017282m.g 2.0kb downstream 2.0kb downstream 6553 true scaffold00098: 263933-270485 Citrus sinensis
orange1.1g017282m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00098: 268486-270485 Citrus sinensis
orange1.1g017282m.g 5.0kb upstream 5.0kb upstream 9553 true scaffold00098: 258933-268485 Citrus sinensis
orange1.1g017282m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00098: 258933-263932 Citrus sinensis
orange1.1g017282m.g 5.0kb downstream 5.0kb downstream 9553 true scaffold00098: 263933-273485 Citrus sinensis
orange1.1g017282m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00098: 268486-273485 Citrus sinensis
orange1.1g017282m.g 10.0kb upstream 10.0kb upstream 14553 true scaffold00098: 253933-268485 Citrus sinensis
orange1.1g017282m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00098: 253933-263932 Citrus sinensis
orange1.1g017282m.g 10.0kb downstream 10.0kb downstream 14553 true scaffold00098: 263933-278485 Citrus sinensis
orange1.1g017282m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00098: 268486-278485 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343862 5266 SBM View MSA
124242139 5268 Malvidae View MSA
124067560 5270 Rosid View MSA
123737432 5271 Pentapetalae View MSA
122786780 5272 Eudicot View MSA
122042815 5273 Angiosperm View MSA
121346314 5274 Embryophyte View MSA
123424294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain