Gene : orange1.1g038885m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11062:SF105 - BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED Genomic Order:  4
Name:  ? orange1.1g038885m.g Secondary Identifier:  ? PAC:18116037
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5980 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g038885m.g 0.5kb upstream 0.5kb upstream 3390 true scaffold00081: 125088-128477 Citrus sinensis
orange1.1g038885m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00081: 127978-128477 Citrus sinensis
orange1.1g038885m.g 0.5kb downstream 0.5kb downstream 3390 true scaffold00081: 124588-127977 Citrus sinensis
orange1.1g038885m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00081: 124588-125087 Citrus sinensis
orange1.1g038885m.g 1.0kb upstream 1.0kb upstream 3890 true scaffold00081: 125088-128977 Citrus sinensis
orange1.1g038885m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00081: 127978-128977 Citrus sinensis
orange1.1g038885m.g 1.0kb downstream 1.0kb downstream 3890 true scaffold00081: 124088-127977 Citrus sinensis
orange1.1g038885m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00081: 124088-125087 Citrus sinensis
orange1.1g038885m.g 2.0kb upstream 2.0kb upstream 4890 true scaffold00081: 125088-129977 Citrus sinensis
orange1.1g038885m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00081: 127978-129977 Citrus sinensis
orange1.1g038885m.g 2.0kb downstream 2.0kb downstream 4890 true scaffold00081: 123088-127977 Citrus sinensis
orange1.1g038885m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00081: 123088-125087 Citrus sinensis
orange1.1g038885m.g 5.0kb upstream 5.0kb upstream 7890 true scaffold00081: 125088-132977 Citrus sinensis
orange1.1g038885m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00081: 127978-132977 Citrus sinensis
orange1.1g038885m.g 5.0kb downstream 5.0kb downstream 7890 true scaffold00081: 120088-127977 Citrus sinensis
orange1.1g038885m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00081: 120088-125087 Citrus sinensis
orange1.1g038885m.g 10.0kb upstream 10.0kb upstream 12890 true scaffold00081: 125088-137977 Citrus sinensis
orange1.1g038885m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00081: 127978-137977 Citrus sinensis
orange1.1g038885m.g 10.0kb downstream 10.0kb downstream 12890 true scaffold00081: 115088-127977 Citrus sinensis
orange1.1g038885m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00081: 115088-125087 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337730 5266 SBM View MSA
124244464 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain