Gene : orange1.1g046808m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11451:SF32 - THREONYL-TRNA SYNTHETASE / THREONINE--TRNA LIGASE-RELATED Genomic Order:  50
Name:  ? orange1.1g046808m.g Secondary Identifier:  ? PAC:18126348
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g046808m.g 0.5kb upstream 0.5kb upstream 4070 true scaffold00077: 381176-385245 Citrus sinensis
orange1.1g046808m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00077: 381176-381675 Citrus sinensis
orange1.1g046808m.g 0.5kb downstream 0.5kb downstream 4070 true scaffold00077: 381676-385745 Citrus sinensis
orange1.1g046808m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00077: 385246-385745 Citrus sinensis
orange1.1g046808m.g 1.0kb upstream 1.0kb upstream 4570 true scaffold00077: 380676-385245 Citrus sinensis
orange1.1g046808m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00077: 380676-381675 Citrus sinensis
orange1.1g046808m.g 1.0kb downstream 1.0kb downstream 4570 true scaffold00077: 381676-386245 Citrus sinensis
orange1.1g046808m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00077: 385246-386245 Citrus sinensis
orange1.1g046808m.g 2.0kb upstream 2.0kb upstream 5570 true scaffold00077: 379676-385245 Citrus sinensis
orange1.1g046808m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00077: 379676-381675 Citrus sinensis
orange1.1g046808m.g 2.0kb downstream 2.0kb downstream 5570 true scaffold00077: 381676-387245 Citrus sinensis
orange1.1g046808m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00077: 385246-387245 Citrus sinensis
orange1.1g046808m.g 5.0kb upstream 5.0kb upstream 8570 true scaffold00077: 376676-385245 Citrus sinensis
orange1.1g046808m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00077: 376676-381675 Citrus sinensis
orange1.1g046808m.g 5.0kb downstream 5.0kb downstream 8570 true scaffold00077: 381676-390245 Citrus sinensis
orange1.1g046808m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00077: 385246-390245 Citrus sinensis
orange1.1g046808m.g 10.0kb upstream 10.0kb upstream 13570 true scaffold00077: 371676-385245 Citrus sinensis
orange1.1g046808m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00077: 371676-381675 Citrus sinensis
orange1.1g046808m.g 10.0kb downstream 10.0kb downstream 13570 true scaffold00077: 381676-395245 Citrus sinensis
orange1.1g046808m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00077: 385246-395245 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337778 5266 SBM View MSA
124251834 5268 Malvidae View MSA
124062778 5270 Rosid View MSA
123739350 5271 Pentapetalae View MSA
122793542 5272 Eudicot View MSA
122044606 5273 Angiosperm View MSA
121343894 5274 Embryophyte View MSA
123425201 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain