Gene : orange1.1g029322m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR13069:SF11 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6 Genomic Order:  2
Name:  ? orange1.1g029322m.g Secondary Identifier:  ? PAC:18129999
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6829 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g029322m.g 0.5kb upstream 0.5kb upstream 2831 true scaffold00102: 17054-19884 Citrus sinensis
orange1.1g029322m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00102: 19385-19884 Citrus sinensis
orange1.1g029322m.g 0.5kb downstream 0.5kb downstream 2831 true scaffold00102: 16554-19384 Citrus sinensis
orange1.1g029322m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00102: 16554-17053 Citrus sinensis
orange1.1g029322m.g 1.0kb upstream 1.0kb upstream 3331 true scaffold00102: 17054-20384 Citrus sinensis
orange1.1g029322m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00102: 19385-20384 Citrus sinensis
orange1.1g029322m.g 1.0kb downstream 1.0kb downstream 3331 true scaffold00102: 16054-19384 Citrus sinensis
orange1.1g029322m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00102: 16054-17053 Citrus sinensis
orange1.1g029322m.g 2.0kb upstream 2.0kb upstream 4331 true scaffold00102: 17054-21384 Citrus sinensis
orange1.1g029322m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00102: 19385-21384 Citrus sinensis
orange1.1g029322m.g 2.0kb downstream 2.0kb downstream 4331 true scaffold00102: 15054-19384 Citrus sinensis
orange1.1g029322m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00102: 15054-17053 Citrus sinensis
orange1.1g029322m.g 5.0kb upstream 5.0kb upstream 7331 true scaffold00102: 17054-24384 Citrus sinensis
orange1.1g029322m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00102: 19385-24384 Citrus sinensis
orange1.1g029322m.g 5.0kb downstream 5.0kb downstream 7331 true scaffold00102: 12054-19384 Citrus sinensis
orange1.1g029322m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00102: 12054-17053 Citrus sinensis
orange1.1g029322m.g 10.0kb upstream 10.0kb upstream 12331 true scaffold00102: 17054-29384 Citrus sinensis
orange1.1g029322m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00102: 19385-29384 Citrus sinensis
orange1.1g029322m.g 10.0kb downstream 10.0kb downstream 12331 true scaffold00102: 7054-19384 Citrus sinensis
orange1.1g029322m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00102: 7054-17053 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341724 5266 SBM View MSA
124239519 5268 Malvidae View MSA
124065403 5270 Rosid View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain