Gene : orange1.1g021155m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10920:SF12 - TRNA (CYTIDINE(32)/GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATED Genomic Order:  13
Name:  ? orange1.1g021155m.g Secondary Identifier:  ? PAC:18097902
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6829 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g021155m.g 0.5kb upstream 0.5kb upstream 5644 true scaffold00145: 144747-150390 Citrus sinensis
orange1.1g021155m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00145: 149891-150390 Citrus sinensis
orange1.1g021155m.g 0.5kb downstream 0.5kb downstream 5644 true scaffold00145: 144247-149890 Citrus sinensis
orange1.1g021155m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00145: 144247-144746 Citrus sinensis
orange1.1g021155m.g 1.0kb upstream 1.0kb upstream 6144 true scaffold00145: 144747-150890 Citrus sinensis
orange1.1g021155m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00145: 149891-150890 Citrus sinensis
orange1.1g021155m.g 1.0kb downstream 1.0kb downstream 6144 true scaffold00145: 143747-149890 Citrus sinensis
orange1.1g021155m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00145: 143747-144746 Citrus sinensis
orange1.1g021155m.g 2.0kb upstream 2.0kb upstream 7144 true scaffold00145: 144747-151890 Citrus sinensis
orange1.1g021155m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00145: 149891-151890 Citrus sinensis
orange1.1g021155m.g 2.0kb downstream 2.0kb downstream 7144 true scaffold00145: 142747-149890 Citrus sinensis
orange1.1g021155m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00145: 142747-144746 Citrus sinensis
orange1.1g021155m.g 5.0kb upstream 5.0kb upstream 10144 true scaffold00145: 144747-154890 Citrus sinensis
orange1.1g021155m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00145: 149891-154890 Citrus sinensis
orange1.1g021155m.g 5.0kb downstream 5.0kb downstream 10144 true scaffold00145: 139747-149890 Citrus sinensis
orange1.1g021155m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00145: 139747-144746 Citrus sinensis
orange1.1g021155m.g 10.0kb upstream 10.0kb upstream 15144 true scaffold00145: 144747-159890 Citrus sinensis
orange1.1g021155m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00145: 149891-159890 Citrus sinensis
orange1.1g021155m.g 10.0kb downstream 10.0kb downstream 15144 true scaffold00145: 134747-149890 Citrus sinensis
orange1.1g021155m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00145: 134747-144746 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345014 5266 SBM View MSA
124239012 5268 Malvidae View MSA
124067188 5270 Rosid View MSA
123742065 5271 Pentapetalae View MSA
122791552 5272 Eudicot View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain