Gene : orange1.1g048396m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR12510 - TROPONIN C-AKIN-1 PROTEIN Genomic Order:  4
Name:  ? orange1.1g048396m.g Secondary Identifier:  ? PAC:18129705
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g048396m.g 0.5kb upstream 0.5kb upstream 1079 true scaffold00246: 59921-60999 Citrus sinensis
orange1.1g048396m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00246: 60500-60999 Citrus sinensis
orange1.1g048396m.g 0.5kb downstream 0.5kb downstream 1079 true scaffold00246: 59421-60499 Citrus sinensis
orange1.1g048396m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00246: 59421-59920 Citrus sinensis
orange1.1g048396m.g 1.0kb upstream 1.0kb upstream 1579 true scaffold00246: 59921-61499 Citrus sinensis
orange1.1g048396m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00246: 60500-61499 Citrus sinensis
orange1.1g048396m.g 1.0kb downstream 1.0kb downstream 1579 true scaffold00246: 58921-60499 Citrus sinensis
orange1.1g048396m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00246: 58921-59920 Citrus sinensis
orange1.1g048396m.g 2.0kb upstream 2.0kb upstream 2579 true scaffold00246: 59921-62499 Citrus sinensis
orange1.1g048396m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00246: 60500-62499 Citrus sinensis
orange1.1g048396m.g 2.0kb downstream 2.0kb downstream 2579 true scaffold00246: 57921-60499 Citrus sinensis
orange1.1g048396m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00246: 57921-59920 Citrus sinensis
orange1.1g048396m.g 5.0kb upstream 5.0kb upstream 5579 true scaffold00246: 59921-65499 Citrus sinensis
orange1.1g048396m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00246: 60500-65499 Citrus sinensis
orange1.1g048396m.g 5.0kb downstream 5.0kb downstream 5579 true scaffold00246: 54921-60499 Citrus sinensis
orange1.1g048396m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00246: 54921-59920 Citrus sinensis
orange1.1g048396m.g 10.0kb upstream 10.0kb upstream 10579 true scaffold00246: 59921-70499 Citrus sinensis
orange1.1g048396m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00246: 60500-70499 Citrus sinensis
orange1.1g048396m.g 10.0kb downstream 10.0kb downstream 10579 true scaffold00246: 49921-60499 Citrus sinensis
orange1.1g048396m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00246: 49921-59920 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340697 5266 SBM View MSA
124246677 5268 Malvidae View MSA
124068981 5270 Rosid View MSA
123739827 5271 Pentapetalae View MSA
122789137 5272 Eudicot View MSA
122047462 5273 Angiosperm View MSA
121349435 5274 Embryophyte View MSA
123425179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain