Gene : orange1.1g036540m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR11709:SF116 - LACCASE-11 Genomic Order:  13
Name:  ? orange1.1g036540m.g Secondary Identifier:  ? PAC:18131297
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5466 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g036540m.g 0.5kb upstream 0.5kb upstream 2671 true scaffold00201: 253394-256064 Citrus sinensis
orange1.1g036540m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00201: 253394-253893 Citrus sinensis
orange1.1g036540m.g 0.5kb downstream 0.5kb downstream 2671 true scaffold00201: 253894-256564 Citrus sinensis
orange1.1g036540m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00201: 256065-256564 Citrus sinensis
orange1.1g036540m.g 1.0kb upstream 1.0kb upstream 3171 true scaffold00201: 252894-256064 Citrus sinensis
orange1.1g036540m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00201: 252894-253893 Citrus sinensis
orange1.1g036540m.g 1.0kb downstream 1.0kb downstream 3171 true scaffold00201: 253894-257064 Citrus sinensis
orange1.1g036540m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00201: 256065-257064 Citrus sinensis
orange1.1g036540m.g 2.0kb upstream 2.0kb upstream 4171 true scaffold00201: 251894-256064 Citrus sinensis
orange1.1g036540m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00201: 251894-253893 Citrus sinensis
orange1.1g036540m.g 2.0kb downstream 2.0kb downstream 4171 true scaffold00201: 253894-258064 Citrus sinensis
orange1.1g036540m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00201: 256065-258064 Citrus sinensis
orange1.1g036540m.g 5.0kb upstream 5.0kb upstream 7171 true scaffold00201: 248894-256064 Citrus sinensis
orange1.1g036540m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00201: 248894-253893 Citrus sinensis
orange1.1g036540m.g 5.0kb downstream 5.0kb downstream 7171 true scaffold00201: 253894-261064 Citrus sinensis
orange1.1g036540m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00201: 256065-261064 Citrus sinensis
orange1.1g036540m.g 10.0kb upstream 10.0kb upstream 12171 true scaffold00201: 243894-256064 Citrus sinensis
orange1.1g036540m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00201: 243894-253893 Citrus sinensis
orange1.1g036540m.g 10.0kb downstream 10.0kb downstream 12171 true scaffold00201: 253894-266064 Citrus sinensis
orange1.1g036540m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00201: 256065-266064 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350795 5266 SBM View MSA
124249575 5268 Malvidae View MSA
124072546 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain