Gene : orange1.1g038404m.g C. sinensis v1.1
Defline:  (1 of 11) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  32
Name:  ? orange1.1g038404m.g Secondary Identifier:  ? PAC:18115188
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5120 Citrus sinensis pathologic  
Csinensis PWY-5910 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g038404m.g 0.5kb upstream 0.5kb upstream 1364 true scaffold00197: 207714-209077 Citrus sinensis
orange1.1g038404m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00197: 207714-208213 Citrus sinensis
orange1.1g038404m.g 0.5kb downstream 0.5kb downstream 1364 true scaffold00197: 208214-209577 Citrus sinensis
orange1.1g038404m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00197: 209078-209577 Citrus sinensis
orange1.1g038404m.g 1.0kb upstream 1.0kb upstream 1864 true scaffold00197: 207214-209077 Citrus sinensis
orange1.1g038404m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00197: 207214-208213 Citrus sinensis
orange1.1g038404m.g 1.0kb downstream 1.0kb downstream 1864 true scaffold00197: 208214-210077 Citrus sinensis
orange1.1g038404m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00197: 209078-210077 Citrus sinensis
orange1.1g038404m.g 2.0kb upstream 2.0kb upstream 2864 true scaffold00197: 206214-209077 Citrus sinensis
orange1.1g038404m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00197: 206214-208213 Citrus sinensis
orange1.1g038404m.g 2.0kb downstream 2.0kb downstream 2864 true scaffold00197: 208214-211077 Citrus sinensis
orange1.1g038404m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00197: 209078-211077 Citrus sinensis
orange1.1g038404m.g 5.0kb upstream 5.0kb upstream 5864 true scaffold00197: 203214-209077 Citrus sinensis
orange1.1g038404m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00197: 203214-208213 Citrus sinensis
orange1.1g038404m.g 5.0kb downstream 5.0kb downstream 5864 true scaffold00197: 208214-214077 Citrus sinensis
orange1.1g038404m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00197: 209078-214077 Citrus sinensis
orange1.1g038404m.g 10.0kb upstream 10.0kb upstream 10864 true scaffold00197: 198214-209077 Citrus sinensis
orange1.1g038404m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00197: 198214-208213 Citrus sinensis
orange1.1g038404m.g 10.0kb downstream 10.0kb downstream 10864 true scaffold00197: 208214-219077 Citrus sinensis
orange1.1g038404m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00197: 209078-219077 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350864 5266 SBM View MSA
124251250 5268 Malvidae View MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain