Gene : orange1.1g035508m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR13040 - AUTOPHAGY PROTEIN 5 Genomic Order:  1
Name:  ? orange1.1g035508m.g Secondary Identifier:  ? PAC:18100485
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g035508m.g 0.5kb upstream 0.5kb upstream 5414 true scaffold00289: 24729-30142 Citrus sinensis
orange1.1g035508m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00289: 24729-25228 Citrus sinensis
orange1.1g035508m.g 0.5kb downstream 0.5kb downstream 5414 true scaffold00289: 25229-30642 Citrus sinensis
orange1.1g035508m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00289: 30143-30642 Citrus sinensis
orange1.1g035508m.g 1.0kb upstream 1.0kb upstream 5914 true scaffold00289: 24229-30142 Citrus sinensis
orange1.1g035508m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00289: 24229-25228 Citrus sinensis
orange1.1g035508m.g 1.0kb downstream 1.0kb downstream 5914 true scaffold00289: 25229-31142 Citrus sinensis
orange1.1g035508m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00289: 30143-31142 Citrus sinensis
orange1.1g035508m.g 2.0kb upstream 2.0kb upstream 6914 true scaffold00289: 23229-30142 Citrus sinensis
orange1.1g035508m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00289: 23229-25228 Citrus sinensis
orange1.1g035508m.g 2.0kb downstream 2.0kb downstream 6914 true scaffold00289: 25229-32142 Citrus sinensis
orange1.1g035508m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00289: 30143-32142 Citrus sinensis
orange1.1g035508m.g 5.0kb upstream 5.0kb upstream 9914 true scaffold00289: 20229-30142 Citrus sinensis
orange1.1g035508m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00289: 20229-25228 Citrus sinensis
orange1.1g035508m.g 5.0kb downstream 5.0kb downstream 9914 true scaffold00289: 25229-35142 Citrus sinensis
orange1.1g035508m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00289: 30143-35142 Citrus sinensis
orange1.1g035508m.g 10.0kb upstream 10.0kb upstream 14914 true scaffold00289: 15229-30142 Citrus sinensis
orange1.1g035508m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00289: 15229-25228 Citrus sinensis
orange1.1g035508m.g 10.0kb downstream 10.0kb downstream 14914 true scaffold00289: 25229-40142 Citrus sinensis
orange1.1g035508m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00289: 30143-40142 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346411 5266 SBM View MSA
124243559 5268 Malvidae View MSA
124066677 5270 Rosid View MSA
123746319 5271 Pentapetalae View MSA
122787337 5272 Eudicot View MSA
122043492 5273 Angiosperm View MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain