Gene : orange1.1g046828m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Genomic Order:  5
Name:  ? orange1.1g046828m.g Secondary Identifier:  ? PAC:18113613
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g046828m.g 0.5kb upstream 0.5kb upstream 3930 true scaffold00269: 47063-50992 Citrus sinensis
orange1.1g046828m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00269: 47063-47562 Citrus sinensis
orange1.1g046828m.g 0.5kb downstream 0.5kb downstream 3930 true scaffold00269: 47563-51492 Citrus sinensis
orange1.1g046828m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00269: 50993-51492 Citrus sinensis
orange1.1g046828m.g 1.0kb upstream 1.0kb upstream 4430 true scaffold00269: 46563-50992 Citrus sinensis
orange1.1g046828m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00269: 46563-47562 Citrus sinensis
orange1.1g046828m.g 1.0kb downstream 1.0kb downstream 4430 true scaffold00269: 47563-51992 Citrus sinensis
orange1.1g046828m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00269: 50993-51992 Citrus sinensis
orange1.1g046828m.g 2.0kb upstream 2.0kb upstream 5430 true scaffold00269: 45563-50992 Citrus sinensis
orange1.1g046828m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00269: 45563-47562 Citrus sinensis
orange1.1g046828m.g 2.0kb downstream 2.0kb downstream 5430 true scaffold00269: 47563-52992 Citrus sinensis
orange1.1g046828m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00269: 50993-52992 Citrus sinensis
orange1.1g046828m.g 5.0kb upstream 5.0kb upstream 8430 true scaffold00269: 42563-50992 Citrus sinensis
orange1.1g046828m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00269: 42563-47562 Citrus sinensis
orange1.1g046828m.g 5.0kb downstream 5.0kb downstream 8430 true scaffold00269: 47563-55992 Citrus sinensis
orange1.1g046828m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00269: 50993-55992 Citrus sinensis
orange1.1g046828m.g 10.0kb upstream 10.0kb upstream 13430 true scaffold00269: 37563-50992 Citrus sinensis
orange1.1g046828m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00269: 37563-47562 Citrus sinensis
orange1.1g046828m.g 10.0kb downstream 10.0kb downstream 13430 true scaffold00269: 47563-60992 Citrus sinensis
orange1.1g046828m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00269: 50993-60992 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121530386 5273 Angiosperm Singleton cluster - no MSA
124329989 5266 SBM Singleton cluster - no MSA
124175241 5268 Malvidae Singleton cluster - no MSA
123897776 5270 Rosid Singleton cluster - no MSA
123479634 5271 Pentapetalae Singleton cluster - no MSA
122514886 5272 Eudicot Singleton cluster - no MSA
120803148 5274 Embryophyte Singleton cluster - no MSA
122844702 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain