Gene : orange1.1g013309m.g C. sinensis v1.1
Defline:  (1 of 53) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  20
Name:  ? orange1.1g013309m.g Secondary Identifier:  ? PAC:18117784
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1081 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g013309m.g 0.5kb upstream 0.5kb upstream 4695 true scaffold00396: 115254-119948 Citrus sinensis
orange1.1g013309m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00396: 119449-119948 Citrus sinensis
orange1.1g013309m.g 0.5kb downstream 0.5kb downstream 4695 true scaffold00396: 114754-119448 Citrus sinensis
orange1.1g013309m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00396: 114754-115253 Citrus sinensis
orange1.1g013309m.g 1.0kb upstream 1.0kb upstream 5195 true scaffold00396: 115254-120448 Citrus sinensis
orange1.1g013309m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00396: 119449-120448 Citrus sinensis
orange1.1g013309m.g 1.0kb downstream 1.0kb downstream 5195 true scaffold00396: 114254-119448 Citrus sinensis
orange1.1g013309m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00396: 114254-115253 Citrus sinensis
orange1.1g013309m.g 2.0kb upstream 2.0kb upstream 6195 true scaffold00396: 115254-121448 Citrus sinensis
orange1.1g013309m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00396: 119449-121448 Citrus sinensis
orange1.1g013309m.g 2.0kb downstream 2.0kb downstream 6195 true scaffold00396: 113254-119448 Citrus sinensis
orange1.1g013309m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00396: 113254-115253 Citrus sinensis
orange1.1g013309m.g 5.0kb upstream 5.0kb upstream 9195 true scaffold00396: 115254-124448 Citrus sinensis
orange1.1g013309m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00396: 119449-124448 Citrus sinensis
orange1.1g013309m.g 5.0kb downstream 5.0kb downstream 9195 true scaffold00396: 110254-119448 Citrus sinensis
orange1.1g013309m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00396: 110254-115253 Citrus sinensis
orange1.1g013309m.g 10.0kb upstream 10.0kb upstream 14195 true scaffold00396: 115254-129448 Citrus sinensis
orange1.1g013309m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00396: 119449-129448 Citrus sinensis
orange1.1g013309m.g 10.0kb downstream 10.0kb downstream 14195 true scaffold00396: 105254-119448 Citrus sinensis
orange1.1g013309m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00396: 105254-115253 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345334 5266 SBM View MSA
124254286 5268 Malvidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain