Gene : orange1.1g047738m.g C. sinensis v1.1
Defline:  (1 of 53) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  10
Name:  ? orange1.1g047738m.g Secondary Identifier:  ? PAC:18117783
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1081 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g047738m.g 0.5kb upstream 0.5kb upstream 5409 true scaffold00396: 63845-69253 Citrus sinensis
orange1.1g047738m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00396: 68754-69253 Citrus sinensis
orange1.1g047738m.g 0.5kb downstream 0.5kb downstream 5409 true scaffold00396: 63345-68753 Citrus sinensis
orange1.1g047738m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00396: 63345-63844 Citrus sinensis
orange1.1g047738m.g 1.0kb upstream 1.0kb upstream 5909 true scaffold00396: 63845-69753 Citrus sinensis
orange1.1g047738m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00396: 68754-69753 Citrus sinensis
orange1.1g047738m.g 1.0kb downstream 1.0kb downstream 5909 true scaffold00396: 62845-68753 Citrus sinensis
orange1.1g047738m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00396: 62845-63844 Citrus sinensis
orange1.1g047738m.g 2.0kb upstream 2.0kb upstream 6909 true scaffold00396: 63845-70753 Citrus sinensis
orange1.1g047738m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00396: 68754-70753 Citrus sinensis
orange1.1g047738m.g 2.0kb downstream 2.0kb downstream 6909 true scaffold00396: 61845-68753 Citrus sinensis
orange1.1g047738m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00396: 61845-63844 Citrus sinensis
orange1.1g047738m.g 5.0kb upstream 5.0kb upstream 9909 true scaffold00396: 63845-73753 Citrus sinensis
orange1.1g047738m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00396: 68754-73753 Citrus sinensis
orange1.1g047738m.g 5.0kb downstream 5.0kb downstream 9909 true scaffold00396: 58845-68753 Citrus sinensis
orange1.1g047738m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00396: 58845-63844 Citrus sinensis
orange1.1g047738m.g 10.0kb upstream 10.0kb upstream 14909 true scaffold00396: 63845-78753 Citrus sinensis
orange1.1g047738m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00396: 68754-78753 Citrus sinensis
orange1.1g047738m.g 10.0kb downstream 10.0kb downstream 14909 true scaffold00396: 53845-68753 Citrus sinensis
orange1.1g047738m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00396: 53845-63844 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346856 5266 SBM View MSA
124252748 5268 Malvidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain