Gene : orange1.1g048799m.g C. sinensis v1.1
Defline:  (1 of 187) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1
Name:  ? orange1.1g048799m.g Secondary Identifier:  ? PAC:18125592
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g048799m.g 0.5kb upstream 0.5kb upstream 1496 true scaffold00375: 10234-11729 Citrus sinensis
orange1.1g048799m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00375: 11230-11729 Citrus sinensis
orange1.1g048799m.g 0.5kb downstream 0.5kb downstream 1496 true scaffold00375: 9734-11229 Citrus sinensis
orange1.1g048799m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00375: 9734-10233 Citrus sinensis
orange1.1g048799m.g 1.0kb upstream 1.0kb upstream 1996 true scaffold00375: 10234-12229 Citrus sinensis
orange1.1g048799m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00375: 11230-12229 Citrus sinensis
orange1.1g048799m.g 1.0kb downstream 1.0kb downstream 1996 true scaffold00375: 9234-11229 Citrus sinensis
orange1.1g048799m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00375: 9234-10233 Citrus sinensis
orange1.1g048799m.g 2.0kb upstream 2.0kb upstream 2996 true scaffold00375: 10234-13229 Citrus sinensis
orange1.1g048799m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00375: 11230-13229 Citrus sinensis
orange1.1g048799m.g 2.0kb downstream 2.0kb downstream 2996 true scaffold00375: 8234-11229 Citrus sinensis
orange1.1g048799m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00375: 8234-10233 Citrus sinensis
orange1.1g048799m.g 5.0kb upstream 5.0kb upstream 5996 true scaffold00375: 10234-16229 Citrus sinensis
orange1.1g048799m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00375: 11230-16229 Citrus sinensis
orange1.1g048799m.g 5.0kb downstream 5.0kb downstream 5996 true scaffold00375: 5234-11229 Citrus sinensis
orange1.1g048799m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00375: 5234-10233 Citrus sinensis
orange1.1g048799m.g 10.0kb upstream 10.0kb upstream 10996 true scaffold00375: 10234-21229 Citrus sinensis
orange1.1g048799m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00375: 11230-21229 Citrus sinensis
orange1.1g048799m.g 10.0kb downstream 10.0kb downstream 10996 true scaffold00375: 234-11229 Citrus sinensis
orange1.1g048799m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00375: 234-10233 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121530705 5273 Angiosperm Singleton cluster - no MSA
124330312 5266 SBM Singleton cluster - no MSA
124175563 5268 Malvidae Singleton cluster - no MSA
123898097 5270 Rosid Singleton cluster - no MSA
123479955 5271 Pentapetalae Singleton cluster - no MSA
122515207 5272 Eudicot Singleton cluster - no MSA
120803467 5274 Embryophyte Singleton cluster - no MSA
122845021 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain