Gene : orange1.1g008066m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  2
Name:  ? orange1.1g008066m.g Secondary Identifier:  ? PAC:18122340
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5466 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g008066m.g 0.5kb upstream 0.5kb upstream 3015 true scaffold00414: 13994-17008 Citrus sinensis
orange1.1g008066m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00414: 16509-17008 Citrus sinensis
orange1.1g008066m.g 0.5kb downstream 0.5kb downstream 3015 true scaffold00414: 13494-16508 Citrus sinensis
orange1.1g008066m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00414: 13494-13993 Citrus sinensis
orange1.1g008066m.g 1.0kb upstream 1.0kb upstream 3515 true scaffold00414: 13994-17508 Citrus sinensis
orange1.1g008066m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00414: 16509-17508 Citrus sinensis
orange1.1g008066m.g 1.0kb downstream 1.0kb downstream 3515 true scaffold00414: 12994-16508 Citrus sinensis
orange1.1g008066m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00414: 12994-13993 Citrus sinensis
orange1.1g008066m.g 2.0kb upstream 2.0kb upstream 4515 true scaffold00414: 13994-18508 Citrus sinensis
orange1.1g008066m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00414: 16509-18508 Citrus sinensis
orange1.1g008066m.g 2.0kb downstream 2.0kb downstream 4515 true scaffold00414: 11994-16508 Citrus sinensis
orange1.1g008066m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00414: 11994-13993 Citrus sinensis
orange1.1g008066m.g 5.0kb upstream 5.0kb upstream 7515 true scaffold00414: 13994-21508 Citrus sinensis
orange1.1g008066m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00414: 16509-21508 Citrus sinensis
orange1.1g008066m.g 5.0kb downstream 5.0kb downstream 7515 true scaffold00414: 8994-16508 Citrus sinensis
orange1.1g008066m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00414: 8994-13993 Citrus sinensis
orange1.1g008066m.g 10.0kb upstream 10.0kb upstream 12515 true scaffold00414: 13994-26508 Citrus sinensis
orange1.1g008066m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00414: 16509-26508 Citrus sinensis
orange1.1g008066m.g 10.0kb downstream 10.0kb downstream 12515 true scaffold00414: 3994-16508 Citrus sinensis
orange1.1g008066m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00414: 3994-13993 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338843 5266 SBM View MSA
124253319 5268 Malvidae View MSA
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain