Gene : orange1.1g010050m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21089//PTHR21089:SF10 - SHIKIMATE DEHYDROGENASE Genomic Order:  12
Name:  ? orange1.1g010050m.g Secondary Identifier:  ? PAC:18117068
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis ARO-PWY Citrus sinensis pathologic  
Csinensis PWY-6163 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g010050m.g 0.5kb upstream 0.5kb upstream 4813 true scaffold00344: 78463-83275 Citrus sinensis
orange1.1g010050m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00344: 82776-83275 Citrus sinensis
orange1.1g010050m.g 0.5kb downstream 0.5kb downstream 4813 true scaffold00344: 77963-82775 Citrus sinensis
orange1.1g010050m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00344: 77963-78462 Citrus sinensis
orange1.1g010050m.g 1.0kb upstream 1.0kb upstream 5313 true scaffold00344: 78463-83775 Citrus sinensis
orange1.1g010050m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00344: 82776-83775 Citrus sinensis
orange1.1g010050m.g 1.0kb downstream 1.0kb downstream 5313 true scaffold00344: 77463-82775 Citrus sinensis
orange1.1g010050m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00344: 77463-78462 Citrus sinensis
orange1.1g010050m.g 2.0kb upstream 2.0kb upstream 6313 true scaffold00344: 78463-84775 Citrus sinensis
orange1.1g010050m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00344: 82776-84775 Citrus sinensis
orange1.1g010050m.g 2.0kb downstream 2.0kb downstream 6313 true scaffold00344: 76463-82775 Citrus sinensis
orange1.1g010050m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00344: 76463-78462 Citrus sinensis
orange1.1g010050m.g 5.0kb upstream 5.0kb upstream 9313 true scaffold00344: 78463-87775 Citrus sinensis
orange1.1g010050m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00344: 82776-87775 Citrus sinensis
orange1.1g010050m.g 5.0kb downstream 5.0kb downstream 9313 true scaffold00344: 73463-82775 Citrus sinensis
orange1.1g010050m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00344: 73463-78462 Citrus sinensis
orange1.1g010050m.g 10.0kb upstream 10.0kb upstream 14313 true scaffold00344: 78463-92775 Citrus sinensis
orange1.1g010050m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00344: 82776-92775 Citrus sinensis
orange1.1g010050m.g 10.0kb downstream 10.0kb downstream 14313 true scaffold00344: 68463-82775 Citrus sinensis
orange1.1g010050m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00344: 68463-78462 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
124348825 5266 SBM View MSA
124246373 5268 Malvidae View MSA
124070168 5270 Rosid View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain