Gene : orange1.1g035521m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR13871:SF49 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  1
Name:  ? orange1.1g035521m.g Secondary Identifier:  ? PAC:18100241
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7039 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g035521m.g 0.5kb upstream 0.5kb upstream 1409 true scaffold00340: 28151-29559 Citrus sinensis
orange1.1g035521m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00340: 29060-29559 Citrus sinensis
orange1.1g035521m.g 0.5kb downstream 0.5kb downstream 1409 true scaffold00340: 27651-29059 Citrus sinensis
orange1.1g035521m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00340: 27651-28150 Citrus sinensis
orange1.1g035521m.g 1.0kb upstream 1.0kb upstream 1909 true scaffold00340: 28151-30059 Citrus sinensis
orange1.1g035521m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00340: 29060-30059 Citrus sinensis
orange1.1g035521m.g 1.0kb downstream 1.0kb downstream 1909 true scaffold00340: 27151-29059 Citrus sinensis
orange1.1g035521m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00340: 27151-28150 Citrus sinensis
orange1.1g035521m.g 2.0kb upstream 2.0kb upstream 2909 true scaffold00340: 28151-31059 Citrus sinensis
orange1.1g035521m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00340: 29060-31059 Citrus sinensis
orange1.1g035521m.g 2.0kb downstream 2.0kb downstream 2909 true scaffold00340: 26151-29059 Citrus sinensis
orange1.1g035521m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00340: 26151-28150 Citrus sinensis
orange1.1g035521m.g 5.0kb upstream 5.0kb upstream 5909 true scaffold00340: 28151-34059 Citrus sinensis
orange1.1g035521m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00340: 29060-34059 Citrus sinensis
orange1.1g035521m.g 5.0kb downstream 5.0kb downstream 5909 true scaffold00340: 23151-29059 Citrus sinensis
orange1.1g035521m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00340: 23151-28150 Citrus sinensis
orange1.1g035521m.g 10.0kb upstream 10.0kb upstream 10909 true scaffold00340: 28151-39059 Citrus sinensis
orange1.1g035521m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00340: 29060-39059 Citrus sinensis
orange1.1g035521m.g 10.0kb downstream 10.0kb downstream 10909 true scaffold00340: 18151-29059 Citrus sinensis
orange1.1g035521m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00340: 18151-28150 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343550 5266 SBM View MSA
124239501 5268 Malvidae View MSA
124074653 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain