Gene : orange1.1g012994m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR22851 - U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN Genomic Order:  2
Name:  ? orange1.1g012994m.g Secondary Identifier:  ? PAC:18131384
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012994m.g 0.5kb upstream 0.5kb upstream 6928 true scaffold00536: 45248-52175 Citrus sinensis
orange1.1g012994m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00536: 45248-45747 Citrus sinensis
orange1.1g012994m.g 0.5kb downstream 0.5kb downstream 6928 true scaffold00536: 45748-52675 Citrus sinensis
orange1.1g012994m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00536: 52176-52675 Citrus sinensis
orange1.1g012994m.g 1.0kb upstream 1.0kb upstream 7428 true scaffold00536: 44748-52175 Citrus sinensis
orange1.1g012994m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00536: 44748-45747 Citrus sinensis
orange1.1g012994m.g 1.0kb downstream 1.0kb downstream 7428 true scaffold00536: 45748-53175 Citrus sinensis
orange1.1g012994m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00536: 52176-53175 Citrus sinensis
orange1.1g012994m.g 2.0kb upstream 2.0kb upstream 8428 true scaffold00536: 43748-52175 Citrus sinensis
orange1.1g012994m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00536: 43748-45747 Citrus sinensis
orange1.1g012994m.g 2.0kb downstream 2.0kb downstream 8428 true scaffold00536: 45748-54175 Citrus sinensis
orange1.1g012994m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00536: 52176-54175 Citrus sinensis
orange1.1g012994m.g 5.0kb upstream 5.0kb upstream 11428 true scaffold00536: 40748-52175 Citrus sinensis
orange1.1g012994m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00536: 40748-45747 Citrus sinensis
orange1.1g012994m.g 5.0kb downstream 5.0kb downstream 11428 true scaffold00536: 45748-57175 Citrus sinensis
orange1.1g012994m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00536: 52176-57175 Citrus sinensis
orange1.1g012994m.g 10.0kb upstream 10.0kb upstream 16428 true scaffold00536: 35748-52175 Citrus sinensis
orange1.1g012994m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00536: 35748-45747 Citrus sinensis
orange1.1g012994m.g 10.0kb downstream 10.0kb downstream 16428 true scaffold00536: 45748-62175 Citrus sinensis
orange1.1g012994m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00536: 52176-62175 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340582 5266 SBM View MSA
124241754 5268 Malvidae View MSA
124063695 5270 Rosid View MSA
123748291 5271 Pentapetalae View MSA
122792543 5272 Eudicot View MSA
122047654 5273 Angiosperm View MSA
121347160 5274 Embryophyte View MSA
123425121 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain