Gene : orange1.1g029942m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR21499:SF1 - HOMOSERINE DEHYDROGENASE Genomic Order:  5
Name:  ? orange1.1g029942m.g Secondary Identifier:  ? PAC:18098101
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis HOMOSERSYN-PWY Citrus sinensis pathologic  
Csinensis PWY-3001 Citrus sinensis pathologic  
Csinensis PWY-724 Citrus sinensis pathologic  
Csinensis THRESYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g029942m.g 0.5kb upstream 0.5kb upstream 2035 true scaffold00606: 84206-86240 Citrus sinensis
orange1.1g029942m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00606: 84206-84705 Citrus sinensis
orange1.1g029942m.g 0.5kb downstream 0.5kb downstream 2035 true scaffold00606: 84706-86740 Citrus sinensis
orange1.1g029942m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00606: 86241-86740 Citrus sinensis
orange1.1g029942m.g 1.0kb upstream 1.0kb upstream 2535 true scaffold00606: 83706-86240 Citrus sinensis
orange1.1g029942m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00606: 83706-84705 Citrus sinensis
orange1.1g029942m.g 1.0kb downstream 1.0kb downstream 2535 true scaffold00606: 84706-87240 Citrus sinensis
orange1.1g029942m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00606: 86241-87240 Citrus sinensis
orange1.1g029942m.g 2.0kb upstream 2.0kb upstream 3535 true scaffold00606: 82706-86240 Citrus sinensis
orange1.1g029942m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00606: 82706-84705 Citrus sinensis
orange1.1g029942m.g 2.0kb downstream 2.0kb downstream 3535 true scaffold00606: 84706-88240 Citrus sinensis
orange1.1g029942m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00606: 86241-88240 Citrus sinensis
orange1.1g029942m.g 5.0kb upstream 5.0kb upstream 6535 true scaffold00606: 79706-86240 Citrus sinensis
orange1.1g029942m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00606: 79706-84705 Citrus sinensis
orange1.1g029942m.g 5.0kb downstream 5.0kb downstream 6535 true scaffold00606: 84706-91240 Citrus sinensis
orange1.1g029942m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00606: 86241-91240 Citrus sinensis
orange1.1g029942m.g 10.0kb upstream 10.0kb upstream 11535 true scaffold00606: 74706-86240 Citrus sinensis
orange1.1g029942m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00606: 74706-84705 Citrus sinensis
orange1.1g029942m.g 10.0kb downstream 10.0kb downstream 11535 true scaffold00606: 84706-96240 Citrus sinensis
orange1.1g029942m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00606: 86241-96240 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121531136 5273 Angiosperm Singleton cluster - no MSA
124330748 5266 SBM Singleton cluster - no MSA
124175996 5268 Malvidae Singleton cluster - no MSA
123898530 5270 Rosid Singleton cluster - no MSA
123480387 5271 Pentapetalae Singleton cluster - no MSA
122515639 5272 Eudicot Singleton cluster - no MSA
120803898 5274 Embryophyte Singleton cluster - no MSA
122845452 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain