Gene : orange1.1g028497m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  7
Name:  ? orange1.1g028497m.g Secondary Identifier:  ? PAC:18123929
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7409 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g028497m.g 0.5kb upstream 0.5kb upstream 7773 true scaffold00603: 82635-90407 Citrus sinensis
orange1.1g028497m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00603: 82635-83134 Citrus sinensis
orange1.1g028497m.g 0.5kb downstream 0.5kb downstream 7773 true scaffold00603: 83135-90907 Citrus sinensis
orange1.1g028497m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00603: 90408-90907 Citrus sinensis
orange1.1g028497m.g 1.0kb upstream 1.0kb upstream 8273 true scaffold00603: 82135-90407 Citrus sinensis
orange1.1g028497m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00603: 82135-83134 Citrus sinensis
orange1.1g028497m.g 1.0kb downstream 1.0kb downstream 8273 true scaffold00603: 83135-91407 Citrus sinensis
orange1.1g028497m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00603: 90408-91407 Citrus sinensis
orange1.1g028497m.g 2.0kb upstream 2.0kb upstream 9273 true scaffold00603: 81135-90407 Citrus sinensis
orange1.1g028497m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00603: 81135-83134 Citrus sinensis
orange1.1g028497m.g 2.0kb downstream 2.0kb downstream 9273 true scaffold00603: 83135-92407 Citrus sinensis
orange1.1g028497m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00603: 90408-92407 Citrus sinensis
orange1.1g028497m.g 5.0kb upstream 5.0kb upstream 12273 true scaffold00603: 78135-90407 Citrus sinensis
orange1.1g028497m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00603: 78135-83134 Citrus sinensis
orange1.1g028497m.g 5.0kb downstream 5.0kb downstream 12273 true scaffold00603: 83135-95407 Citrus sinensis
orange1.1g028497m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00603: 90408-95407 Citrus sinensis
orange1.1g028497m.g 10.0kb upstream 10.0kb upstream 17273 true scaffold00603: 73135-90407 Citrus sinensis
orange1.1g028497m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00603: 73135-83134 Citrus sinensis
orange1.1g028497m.g 10.0kb downstream 10.0kb downstream 15181 true scaffold00603: 83135-98315 Citrus sinensis
orange1.1g028497m.g 10.0kb downstream 10.0kb downstream 7908 false scaffold00603: 90408-98315 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341346 5266 SBM View MSA
124240087 5268 Malvidae View MSA
124067594 5270 Rosid View MSA
123739367 5271 Pentapetalae View MSA
122793263 5272 Eudicot View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain