Gene : orange1.1g009957m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR10314:SF125 - THREONINE SYNTHASE 2, CHLOROPLASTIC Genomic Order:  4
Name:  ? orange1.1g009957m.g Secondary Identifier:  ? PAC:18131328
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis HOMOSER-THRESYN-PWY Citrus sinensis pathologic  
Csinensis PWY-3001 Citrus sinensis pathologic  
Csinensis PWY-724 Citrus sinensis pathologic  
Csinensis THRESYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009957m.g 0.5kb upstream 0.5kb upstream 2707 true scaffold00469: 94223-96929 Citrus sinensis
orange1.1g009957m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00469: 96430-96929 Citrus sinensis
orange1.1g009957m.g 0.5kb downstream 0.5kb downstream 2707 true scaffold00469: 93723-96429 Citrus sinensis
orange1.1g009957m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00469: 93723-94222 Citrus sinensis
orange1.1g009957m.g 1.0kb upstream 1.0kb upstream 3207 true scaffold00469: 94223-97429 Citrus sinensis
orange1.1g009957m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00469: 96430-97429 Citrus sinensis
orange1.1g009957m.g 1.0kb downstream 1.0kb downstream 3207 true scaffold00469: 93223-96429 Citrus sinensis
orange1.1g009957m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00469: 93223-94222 Citrus sinensis
orange1.1g009957m.g 2.0kb upstream 2.0kb upstream 4207 true scaffold00469: 94223-98429 Citrus sinensis
orange1.1g009957m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00469: 96430-98429 Citrus sinensis
orange1.1g009957m.g 2.0kb downstream 2.0kb downstream 4207 true scaffold00469: 92223-96429 Citrus sinensis
orange1.1g009957m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00469: 92223-94222 Citrus sinensis
orange1.1g009957m.g 5.0kb upstream 5.0kb upstream 7207 true scaffold00469: 94223-101429 Citrus sinensis
orange1.1g009957m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00469: 96430-101429 Citrus sinensis
orange1.1g009957m.g 5.0kb downstream 5.0kb downstream 7207 true scaffold00469: 89223-96429 Citrus sinensis
orange1.1g009957m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00469: 89223-94222 Citrus sinensis
orange1.1g009957m.g 10.0kb upstream 10.0kb upstream 12207 true scaffold00469: 94223-106429 Citrus sinensis
orange1.1g009957m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00469: 96430-106429 Citrus sinensis
orange1.1g009957m.g 10.0kb downstream 10.0kb downstream 12207 true scaffold00469: 84223-96429 Citrus sinensis
orange1.1g009957m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00469: 84223-94222 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041159 5273 Angiosperm View MSA
124333792 5266 SBM View MSA
124251759 5268 Malvidae View MSA
124069376 5270 Rosid View MSA
123748441 5271 Pentapetalae View MSA
122786729 5272 Eudicot View MSA
121349368 5274 Embryophyte View MSA
123424940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain