Gene : orange1.1g016569m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  7
Name:  ? orange1.1g016569m.g Secondary Identifier:  ? PAC:18124526
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g016569m.g 0.5kb upstream 0.5kb upstream 1798 true scaffold00450: 29842-31639 Citrus sinensis
orange1.1g016569m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00450: 29842-30341 Citrus sinensis
orange1.1g016569m.g 0.5kb downstream 0.5kb downstream 1798 true scaffold00450: 30342-32139 Citrus sinensis
orange1.1g016569m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00450: 31640-32139 Citrus sinensis
orange1.1g016569m.g 1.0kb upstream 1.0kb upstream 2298 true scaffold00450: 29342-31639 Citrus sinensis
orange1.1g016569m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00450: 29342-30341 Citrus sinensis
orange1.1g016569m.g 1.0kb downstream 1.0kb downstream 2298 true scaffold00450: 30342-32639 Citrus sinensis
orange1.1g016569m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00450: 31640-32639 Citrus sinensis
orange1.1g016569m.g 2.0kb upstream 2.0kb upstream 3298 true scaffold00450: 28342-31639 Citrus sinensis
orange1.1g016569m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00450: 28342-30341 Citrus sinensis
orange1.1g016569m.g 2.0kb downstream 2.0kb downstream 3298 true scaffold00450: 30342-33639 Citrus sinensis
orange1.1g016569m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00450: 31640-33639 Citrus sinensis
orange1.1g016569m.g 5.0kb upstream 5.0kb upstream 6298 true scaffold00450: 25342-31639 Citrus sinensis
orange1.1g016569m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00450: 25342-30341 Citrus sinensis
orange1.1g016569m.g 5.0kb downstream 5.0kb downstream 6298 true scaffold00450: 30342-36639 Citrus sinensis
orange1.1g016569m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00450: 31640-36639 Citrus sinensis
orange1.1g016569m.g 10.0kb upstream 10.0kb upstream 11298 true scaffold00450: 20342-31639 Citrus sinensis
orange1.1g016569m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00450: 20342-30341 Citrus sinensis
orange1.1g016569m.g 10.0kb downstream 10.0kb downstream 11298 true scaffold00450: 30342-41639 Citrus sinensis
orange1.1g016569m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00450: 31640-41639 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342299 5266 SBM View MSA
124240993 5268 Malvidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain