Gene : orange1.1g028699m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  4
Name:  ? orange1.1g028699m.g Secondary Identifier:  ? PAC:18122402
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g028699m.g 0.5kb upstream 0.5kb upstream 1725 true scaffold00424: 40372-42096 Citrus sinensis
orange1.1g028699m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00424: 40372-40871 Citrus sinensis
orange1.1g028699m.g 0.5kb downstream 0.5kb downstream 1725 true scaffold00424: 40872-42596 Citrus sinensis
orange1.1g028699m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00424: 42097-42596 Citrus sinensis
orange1.1g028699m.g 1.0kb upstream 1.0kb upstream 2225 true scaffold00424: 39872-42096 Citrus sinensis
orange1.1g028699m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00424: 39872-40871 Citrus sinensis
orange1.1g028699m.g 1.0kb downstream 1.0kb downstream 2225 true scaffold00424: 40872-43096 Citrus sinensis
orange1.1g028699m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00424: 42097-43096 Citrus sinensis
orange1.1g028699m.g 2.0kb upstream 2.0kb upstream 3225 true scaffold00424: 38872-42096 Citrus sinensis
orange1.1g028699m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00424: 38872-40871 Citrus sinensis
orange1.1g028699m.g 2.0kb downstream 2.0kb downstream 3225 true scaffold00424: 40872-44096 Citrus sinensis
orange1.1g028699m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00424: 42097-44096 Citrus sinensis
orange1.1g028699m.g 5.0kb upstream 5.0kb upstream 6225 true scaffold00424: 35872-42096 Citrus sinensis
orange1.1g028699m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00424: 35872-40871 Citrus sinensis
orange1.1g028699m.g 5.0kb downstream 5.0kb downstream 6225 true scaffold00424: 40872-47096 Citrus sinensis
orange1.1g028699m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00424: 42097-47096 Citrus sinensis
orange1.1g028699m.g 10.0kb upstream 10.0kb upstream 11225 true scaffold00424: 30872-42096 Citrus sinensis
orange1.1g028699m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00424: 30872-40871 Citrus sinensis
orange1.1g028699m.g 10.0kb downstream 10.0kb downstream 11225 true scaffold00424: 40872-52096 Citrus sinensis
orange1.1g028699m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00424: 42097-52096 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337661 5266 SBM View MSA
124244960 5268 Malvidae View MSA
124063298 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain