Gene : orange1.1g012183m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR21049 - RIBOPHORIN I Genomic Order:  2
Name:  ? orange1.1g012183m.g Secondary Identifier:  ? PAC:18120173
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012183m.g 0.5kb upstream 0.5kb upstream 5280 true scaffold00419: 13698-18977 Citrus sinensis
orange1.1g012183m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00419: 13698-14197 Citrus sinensis
orange1.1g012183m.g 0.5kb downstream 0.5kb downstream 5280 true scaffold00419: 14198-19477 Citrus sinensis
orange1.1g012183m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00419: 18978-19477 Citrus sinensis
orange1.1g012183m.g 1.0kb upstream 1.0kb upstream 5780 true scaffold00419: 13198-18977 Citrus sinensis
orange1.1g012183m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00419: 13198-14197 Citrus sinensis
orange1.1g012183m.g 1.0kb downstream 1.0kb downstream 5780 true scaffold00419: 14198-19977 Citrus sinensis
orange1.1g012183m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00419: 18978-19977 Citrus sinensis
orange1.1g012183m.g 2.0kb upstream 2.0kb upstream 6780 true scaffold00419: 12198-18977 Citrus sinensis
orange1.1g012183m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00419: 12198-14197 Citrus sinensis
orange1.1g012183m.g 2.0kb downstream 2.0kb downstream 6780 true scaffold00419: 14198-20977 Citrus sinensis
orange1.1g012183m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00419: 18978-20977 Citrus sinensis
orange1.1g012183m.g 5.0kb upstream 5.0kb upstream 9780 true scaffold00419: 9198-18977 Citrus sinensis
orange1.1g012183m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00419: 9198-14197 Citrus sinensis
orange1.1g012183m.g 5.0kb downstream 5.0kb downstream 9780 true scaffold00419: 14198-23977 Citrus sinensis
orange1.1g012183m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00419: 18978-23977 Citrus sinensis
orange1.1g012183m.g 10.0kb upstream 10.0kb upstream 14780 true scaffold00419: 4198-18977 Citrus sinensis
orange1.1g012183m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00419: 4198-14197 Citrus sinensis
orange1.1g012183m.g 10.0kb downstream 10.0kb downstream 14780 true scaffold00419: 14198-28977 Citrus sinensis
orange1.1g012183m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00419: 18978-28977 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338383 5266 SBM View MSA
124238095 5268 Malvidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain