Gene : orange1.1g040060m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR11830 - 40S RIBOSOMAL PROTEIN S3A Genomic Order:  4
Name:  ? orange1.1g040060m.g Secondary Identifier:  ? PAC:18131390
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040060m.g 0.5kb upstream 0.5kb upstream 2517 true scaffold00505: 32864-35380 Citrus sinensis
orange1.1g040060m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00505: 34881-35380 Citrus sinensis
orange1.1g040060m.g 0.5kb downstream 0.5kb downstream 2517 true scaffold00505: 32364-34880 Citrus sinensis
orange1.1g040060m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00505: 32364-32863 Citrus sinensis
orange1.1g040060m.g 1.0kb upstream 1.0kb upstream 3017 true scaffold00505: 32864-35880 Citrus sinensis
orange1.1g040060m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00505: 34881-35880 Citrus sinensis
orange1.1g040060m.g 1.0kb downstream 1.0kb downstream 3017 true scaffold00505: 31864-34880 Citrus sinensis
orange1.1g040060m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00505: 31864-32863 Citrus sinensis
orange1.1g040060m.g 2.0kb upstream 2.0kb upstream 4017 true scaffold00505: 32864-36880 Citrus sinensis
orange1.1g040060m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00505: 34881-36880 Citrus sinensis
orange1.1g040060m.g 2.0kb downstream 2.0kb downstream 4017 true scaffold00505: 30864-34880 Citrus sinensis
orange1.1g040060m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00505: 30864-32863 Citrus sinensis
orange1.1g040060m.g 5.0kb upstream 5.0kb upstream 7017 true scaffold00505: 32864-39880 Citrus sinensis
orange1.1g040060m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00505: 34881-39880 Citrus sinensis
orange1.1g040060m.g 5.0kb downstream 5.0kb downstream 7017 true scaffold00505: 27864-34880 Citrus sinensis
orange1.1g040060m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00505: 27864-32863 Citrus sinensis
orange1.1g040060m.g 10.0kb upstream 10.0kb upstream 12017 true scaffold00505: 32864-44880 Citrus sinensis
orange1.1g040060m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00505: 34881-44880 Citrus sinensis
orange1.1g040060m.g 10.0kb downstream 10.0kb downstream 12017 true scaffold00505: 22864-34880 Citrus sinensis
orange1.1g040060m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00505: 22864-32863 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121530970 5273 Angiosperm Singleton cluster - no MSA
124330580 5266 SBM Singleton cluster - no MSA
124175829 5268 Malvidae Singleton cluster - no MSA
123898363 5270 Rosid Singleton cluster - no MSA
123480220 5271 Pentapetalae Singleton cluster - no MSA
122515472 5272 Eudicot Singleton cluster - no MSA
120803732 5274 Embryophyte Singleton cluster - no MSA
122845286 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain