Gene : orange1.1g027843m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  3
Name:  ? orange1.1g027843m.g Secondary Identifier:  ? PAC:18119637
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PHOTOALL-PWY Citrus sinensis pathologic  
Csinensis PWY-101 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027843m.g 0.5kb upstream 0.5kb upstream 1737 true scaffold00500: 15472-17208 Citrus sinensis
orange1.1g027843m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00500: 16709-17208 Citrus sinensis
orange1.1g027843m.g 0.5kb downstream 0.5kb downstream 1737 true scaffold00500: 14972-16708 Citrus sinensis
orange1.1g027843m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00500: 14972-15471 Citrus sinensis
orange1.1g027843m.g 1.0kb upstream 1.0kb upstream 2237 true scaffold00500: 15472-17708 Citrus sinensis
orange1.1g027843m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00500: 16709-17708 Citrus sinensis
orange1.1g027843m.g 1.0kb downstream 1.0kb downstream 2237 true scaffold00500: 14472-16708 Citrus sinensis
orange1.1g027843m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00500: 14472-15471 Citrus sinensis
orange1.1g027843m.g 2.0kb upstream 2.0kb upstream 3237 true scaffold00500: 15472-18708 Citrus sinensis
orange1.1g027843m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00500: 16709-18708 Citrus sinensis
orange1.1g027843m.g 2.0kb downstream 2.0kb downstream 3237 true scaffold00500: 13472-16708 Citrus sinensis
orange1.1g027843m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00500: 13472-15471 Citrus sinensis
orange1.1g027843m.g 5.0kb upstream 5.0kb upstream 6237 true scaffold00500: 15472-21708 Citrus sinensis
orange1.1g027843m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00500: 16709-21708 Citrus sinensis
orange1.1g027843m.g 5.0kb downstream 5.0kb downstream 6237 true scaffold00500: 10472-16708 Citrus sinensis
orange1.1g027843m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00500: 10472-15471 Citrus sinensis
orange1.1g027843m.g 10.0kb upstream 10.0kb upstream 11237 true scaffold00500: 15472-26708 Citrus sinensis
orange1.1g027843m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00500: 16709-26708 Citrus sinensis
orange1.1g027843m.g 10.0kb downstream 10.0kb downstream 11237 true scaffold00500: 5472-16708 Citrus sinensis
orange1.1g027843m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00500: 5472-15471 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
124343130 5266 SBM View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain