Gene : orange1.1g004768m.g C. sinensis v1.1
Defline:  (1 of 3) 1.2.1.27 - Methylmalonate-semialdehyde dehydrogenase (CoA acylating) / MSDH Genomic Order:  6
Name:  ? orange1.1g004768m.g Secondary Identifier:  ? PAC:18120692
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis VALDEG-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g004768m.g 0.5kb upstream 0.5kb upstream 12045 true scaffold00451: 81738-93782 Citrus sinensis
orange1.1g004768m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00451: 93283-93782 Citrus sinensis
orange1.1g004768m.g 0.5kb downstream 0.5kb downstream 12045 true scaffold00451: 81238-93282 Citrus sinensis
orange1.1g004768m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00451: 81238-81737 Citrus sinensis
orange1.1g004768m.g 1.0kb upstream 1.0kb upstream 12545 true scaffold00451: 81738-94282 Citrus sinensis
orange1.1g004768m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00451: 93283-94282 Citrus sinensis
orange1.1g004768m.g 1.0kb downstream 1.0kb downstream 12545 true scaffold00451: 80738-93282 Citrus sinensis
orange1.1g004768m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00451: 80738-81737 Citrus sinensis
orange1.1g004768m.g 2.0kb upstream 2.0kb upstream 13545 true scaffold00451: 81738-95282 Citrus sinensis
orange1.1g004768m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00451: 93283-95282 Citrus sinensis
orange1.1g004768m.g 2.0kb downstream 2.0kb downstream 13545 true scaffold00451: 79738-93282 Citrus sinensis
orange1.1g004768m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00451: 79738-81737 Citrus sinensis
orange1.1g004768m.g 5.0kb upstream 5.0kb upstream 16545 true scaffold00451: 81738-98282 Citrus sinensis
orange1.1g004768m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00451: 93283-98282 Citrus sinensis
orange1.1g004768m.g 5.0kb downstream 5.0kb downstream 16545 true scaffold00451: 76738-93282 Citrus sinensis
orange1.1g004768m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00451: 76738-81737 Citrus sinensis
orange1.1g004768m.g 10.0kb upstream 10.0kb upstream 21545 true scaffold00451: 81738-103282 Citrus sinensis
orange1.1g004768m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00451: 93283-103282 Citrus sinensis
orange1.1g004768m.g 10.0kb downstream 10.0kb downstream 21545 true scaffold00451: 71738-93282 Citrus sinensis
orange1.1g004768m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00451: 71738-81737 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780918 5273 Angiosperm View MSA
124347780 5266 SBM View MSA
124245433 5268 Malvidae View MSA
124071727 5270 Rosid View MSA
123748275 5271 Pentapetalae View MSA
122772530 5272 Eudicot View MSA
121052516 5274 Embryophyte View MSA
123092560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain