Gene : orange1.1g002816m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  99
Name:  ? orange1.1g002816m.g Secondary Identifier:  ? PAC:18136900
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g002816m.g 0.5kb upstream 0.5kb upstream 11130 true scaffold00001: 700427-711556 Citrus sinensis
orange1.1g002816m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 711057-711556 Citrus sinensis
orange1.1g002816m.g 0.5kb downstream 0.5kb downstream 11130 true scaffold00001: 699927-711056 Citrus sinensis
orange1.1g002816m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 699927-700426 Citrus sinensis
orange1.1g002816m.g 1.0kb upstream 1.0kb upstream 11630 true scaffold00001: 700427-712056 Citrus sinensis
orange1.1g002816m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 711057-712056 Citrus sinensis
orange1.1g002816m.g 1.0kb downstream 1.0kb downstream 11630 true scaffold00001: 699427-711056 Citrus sinensis
orange1.1g002816m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 699427-700426 Citrus sinensis
orange1.1g002816m.g 2.0kb upstream 2.0kb upstream 12630 true scaffold00001: 700427-713056 Citrus sinensis
orange1.1g002816m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 711057-713056 Citrus sinensis
orange1.1g002816m.g 2.0kb downstream 2.0kb downstream 12630 true scaffold00001: 698427-711056 Citrus sinensis
orange1.1g002816m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 698427-700426 Citrus sinensis
orange1.1g002816m.g 5.0kb upstream 5.0kb upstream 15630 true scaffold00001: 700427-716056 Citrus sinensis
orange1.1g002816m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 711057-716056 Citrus sinensis
orange1.1g002816m.g 5.0kb downstream 5.0kb downstream 15630 true scaffold00001: 695427-711056 Citrus sinensis
orange1.1g002816m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 695427-700426 Citrus sinensis
orange1.1g002816m.g 10.0kb upstream 10.0kb upstream 20630 true scaffold00001: 700427-721056 Citrus sinensis
orange1.1g002816m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 711057-721056 Citrus sinensis
orange1.1g002816m.g 10.0kb downstream 10.0kb downstream 20630 true scaffold00001: 690427-711056 Citrus sinensis
orange1.1g002816m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 690427-700426 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344060 5266 SBM View MSA
124251962 5268 Malvidae View MSA
124061906 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain