Gene : orange1.1g039172m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11735:SF12 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED Genomic Order:  159
Name:  ? orange1.1g039172m.g Secondary Identifier:  ? PAC:18136959
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY0-1587 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039172m.g 0.5kb upstream 0.5kb upstream 4893 true scaffold00001: 1138257-1143149 Citrus sinensis
orange1.1g039172m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 1138257-1138756 Citrus sinensis
orange1.1g039172m.g 0.5kb downstream 0.5kb downstream 4893 true scaffold00001: 1138757-1143649 Citrus sinensis
orange1.1g039172m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 1143150-1143649 Citrus sinensis
orange1.1g039172m.g 1.0kb upstream 1.0kb upstream 5393 true scaffold00001: 1137757-1143149 Citrus sinensis
orange1.1g039172m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 1137757-1138756 Citrus sinensis
orange1.1g039172m.g 1.0kb downstream 1.0kb downstream 5393 true scaffold00001: 1138757-1144149 Citrus sinensis
orange1.1g039172m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 1143150-1144149 Citrus sinensis
orange1.1g039172m.g 2.0kb upstream 2.0kb upstream 6393 true scaffold00001: 1136757-1143149 Citrus sinensis
orange1.1g039172m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 1136757-1138756 Citrus sinensis
orange1.1g039172m.g 2.0kb downstream 2.0kb downstream 6393 true scaffold00001: 1138757-1145149 Citrus sinensis
orange1.1g039172m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 1143150-1145149 Citrus sinensis
orange1.1g039172m.g 5.0kb upstream 5.0kb upstream 9393 true scaffold00001: 1133757-1143149 Citrus sinensis
orange1.1g039172m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 1133757-1138756 Citrus sinensis
orange1.1g039172m.g 5.0kb downstream 5.0kb downstream 9393 true scaffold00001: 1138757-1148149 Citrus sinensis
orange1.1g039172m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 1143150-1148149 Citrus sinensis
orange1.1g039172m.g 10.0kb upstream 10.0kb upstream 14393 true scaffold00001: 1128757-1143149 Citrus sinensis
orange1.1g039172m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 1128757-1138756 Citrus sinensis
orange1.1g039172m.g 10.0kb downstream 10.0kb downstream 14393 true scaffold00001: 1138757-1153149 Citrus sinensis
orange1.1g039172m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 1143150-1153149 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350646 5266 SBM View MSA
124246525 5268 Malvidae View MSA
124066071 5270 Rosid View MSA
123747951 5271 Pentapetalae View MSA
122791458 5272 Eudicot View MSA
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain