Gene : orange1.1g014922m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10742:SF294 - PROTOPORPHYRINOGEN OXIDASE 1, CHLOROPLASTIC Genomic Order:  568
Name:  ? orange1.1g014922m.g Secondary Identifier:  ? PAC:18136943
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis CHLOROPHYLL-SYN Citrus sinensis pathologic  
Csinensis HEME-BIOSYNTHESIS-II Citrus sinensis pathologic  
Csinensis PWY-5918 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g014922m.g 0.5kb upstream 0.5kb upstream 5303 true scaffold00001: 3789866-3795168 Citrus sinensis
orange1.1g014922m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 3789866-3790365 Citrus sinensis
orange1.1g014922m.g 0.5kb downstream 0.5kb downstream 5303 true scaffold00001: 3790366-3795668 Citrus sinensis
orange1.1g014922m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 3795169-3795668 Citrus sinensis
orange1.1g014922m.g 1.0kb upstream 1.0kb upstream 5803 true scaffold00001: 3789366-3795168 Citrus sinensis
orange1.1g014922m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 3789366-3790365 Citrus sinensis
orange1.1g014922m.g 1.0kb downstream 1.0kb downstream 5803 true scaffold00001: 3790366-3796168 Citrus sinensis
orange1.1g014922m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 3795169-3796168 Citrus sinensis
orange1.1g014922m.g 2.0kb upstream 2.0kb upstream 6803 true scaffold00001: 3788366-3795168 Citrus sinensis
orange1.1g014922m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 3788366-3790365 Citrus sinensis
orange1.1g014922m.g 2.0kb downstream 2.0kb downstream 6803 true scaffold00001: 3790366-3797168 Citrus sinensis
orange1.1g014922m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 3795169-3797168 Citrus sinensis
orange1.1g014922m.g 5.0kb upstream 5.0kb upstream 9803 true scaffold00001: 3785366-3795168 Citrus sinensis
orange1.1g014922m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 3785366-3790365 Citrus sinensis
orange1.1g014922m.g 5.0kb downstream 5.0kb downstream 9803 true scaffold00001: 3790366-3800168 Citrus sinensis
orange1.1g014922m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 3795169-3800168 Citrus sinensis
orange1.1g014922m.g 10.0kb upstream 10.0kb upstream 14803 true scaffold00001: 3780366-3795168 Citrus sinensis
orange1.1g014922m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 3780366-3790365 Citrus sinensis
orange1.1g014922m.g 10.0kb downstream 10.0kb downstream 14803 true scaffold00001: 3790366-3805168 Citrus sinensis
orange1.1g014922m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 3795169-3805168 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343518 5266 SBM View MSA
124242274 5268 Malvidae View MSA
124065931 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain