Gene : orange1.1g024968m.g C. sinensis v1.1
Defline:  (1 of 4) 2.1.1.229 - tRNA (carboxymethyluridine(34)-5-O)-methyltransferase / tRNA methyltransferase 9 Genomic Order:  784
Name:  ? orange1.1g024968m.g Secondary Identifier:  ? PAC:18137768
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6829 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g024968m.g 0.5kb upstream 0.5kb upstream 2984 true scaffold00001: 5259994-5262977 Citrus sinensis
orange1.1g024968m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 5262478-5262977 Citrus sinensis
orange1.1g024968m.g 0.5kb downstream 0.5kb downstream 2984 true scaffold00001: 5259494-5262477 Citrus sinensis
orange1.1g024968m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 5259494-5259993 Citrus sinensis
orange1.1g024968m.g 1.0kb upstream 1.0kb upstream 3484 true scaffold00001: 5259994-5263477 Citrus sinensis
orange1.1g024968m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 5262478-5263477 Citrus sinensis
orange1.1g024968m.g 1.0kb downstream 1.0kb downstream 3484 true scaffold00001: 5258994-5262477 Citrus sinensis
orange1.1g024968m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 5258994-5259993 Citrus sinensis
orange1.1g024968m.g 2.0kb upstream 2.0kb upstream 4484 true scaffold00001: 5259994-5264477 Citrus sinensis
orange1.1g024968m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 5262478-5264477 Citrus sinensis
orange1.1g024968m.g 2.0kb downstream 2.0kb downstream 4484 true scaffold00001: 5257994-5262477 Citrus sinensis
orange1.1g024968m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 5257994-5259993 Citrus sinensis
orange1.1g024968m.g 5.0kb upstream 5.0kb upstream 7484 true scaffold00001: 5259994-5267477 Citrus sinensis
orange1.1g024968m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 5262478-5267477 Citrus sinensis
orange1.1g024968m.g 5.0kb downstream 5.0kb downstream 7484 true scaffold00001: 5254994-5262477 Citrus sinensis
orange1.1g024968m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 5254994-5259993 Citrus sinensis
orange1.1g024968m.g 10.0kb upstream 10.0kb upstream 12484 true scaffold00001: 5259994-5272477 Citrus sinensis
orange1.1g024968m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 5262478-5272477 Citrus sinensis
orange1.1g024968m.g 10.0kb downstream 10.0kb downstream 12484 true scaffold00001: 5249994-5262477 Citrus sinensis
orange1.1g024968m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 5249994-5259993 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338560 5266 SBM View MSA
124243194 5268 Malvidae View MSA
124068599 5270 Rosid View MSA
123740892 5271 Pentapetalae View MSA
122793671 5272 Eudicot View MSA
122046991 5273 Angiosperm View MSA
121347521 5274 Embryophyte View MSA
123425237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain