Gene : orange1.1g046749m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  401
Name:  ? orange1.1g046749m.g Secondary Identifier:  ? PAC:18137706
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5695 Citrus sinensis pathologic  
Csinensis PWY-6608 Citrus sinensis pathologic  
Csinensis PWY-6609 Citrus sinensis pathologic  
Csinensis PWY-7179 Citrus sinensis pathologic  
Csinensis SALVADEHYPOX-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g046749m.g 0.5kb upstream 0.5kb upstream 5477 true scaffold00001: 2553939-2559415 Citrus sinensis
orange1.1g046749m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 2558916-2559415 Citrus sinensis
orange1.1g046749m.g 0.5kb downstream 0.5kb downstream 5477 true scaffold00001: 2553439-2558915 Citrus sinensis
orange1.1g046749m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 2553439-2553938 Citrus sinensis
orange1.1g046749m.g 1.0kb upstream 1.0kb upstream 5977 true scaffold00001: 2553939-2559915 Citrus sinensis
orange1.1g046749m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 2558916-2559915 Citrus sinensis
orange1.1g046749m.g 1.0kb downstream 1.0kb downstream 5977 true scaffold00001: 2552939-2558915 Citrus sinensis
orange1.1g046749m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 2552939-2553938 Citrus sinensis
orange1.1g046749m.g 2.0kb upstream 2.0kb upstream 6977 true scaffold00001: 2553939-2560915 Citrus sinensis
orange1.1g046749m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 2558916-2560915 Citrus sinensis
orange1.1g046749m.g 2.0kb downstream 2.0kb downstream 6977 true scaffold00001: 2551939-2558915 Citrus sinensis
orange1.1g046749m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 2551939-2553938 Citrus sinensis
orange1.1g046749m.g 5.0kb upstream 5.0kb upstream 9977 true scaffold00001: 2553939-2563915 Citrus sinensis
orange1.1g046749m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 2558916-2563915 Citrus sinensis
orange1.1g046749m.g 5.0kb downstream 5.0kb downstream 9977 true scaffold00001: 2548939-2558915 Citrus sinensis
orange1.1g046749m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 2548939-2553938 Citrus sinensis
orange1.1g046749m.g 10.0kb upstream 10.0kb upstream 14977 true scaffold00001: 2553939-2568915 Citrus sinensis
orange1.1g046749m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 2558916-2568915 Citrus sinensis
orange1.1g046749m.g 10.0kb downstream 10.0kb downstream 14977 true scaffold00001: 2543939-2558915 Citrus sinensis
orange1.1g046749m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 2543939-2553938 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain