Gene : orange1.1g011127m.g C. sinensis v1.1
Defline:  (1 of 1) KOG0231 - Junctional membrane complex protein Junctophilin and related MORN repeat proteins Genomic Order:  42
Name:  ? orange1.1g011127m.g Secondary Identifier:  ? PAC:18137502
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6351 Citrus sinensis pathologic  
Csinensis PWY-6352 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g011127m.g 0.5kb upstream 0.5kb upstream 3575 true scaffold00001: 274040-277614 Citrus sinensis
orange1.1g011127m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00001: 277115-277614 Citrus sinensis
orange1.1g011127m.g 0.5kb downstream 0.5kb downstream 3575 true scaffold00001: 273540-277114 Citrus sinensis
orange1.1g011127m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00001: 273540-274039 Citrus sinensis
orange1.1g011127m.g 1.0kb upstream 1.0kb upstream 4075 true scaffold00001: 274040-278114 Citrus sinensis
orange1.1g011127m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00001: 277115-278114 Citrus sinensis
orange1.1g011127m.g 1.0kb downstream 1.0kb downstream 4075 true scaffold00001: 273040-277114 Citrus sinensis
orange1.1g011127m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00001: 273040-274039 Citrus sinensis
orange1.1g011127m.g 2.0kb upstream 2.0kb upstream 5075 true scaffold00001: 274040-279114 Citrus sinensis
orange1.1g011127m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00001: 277115-279114 Citrus sinensis
orange1.1g011127m.g 2.0kb downstream 2.0kb downstream 5075 true scaffold00001: 272040-277114 Citrus sinensis
orange1.1g011127m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00001: 272040-274039 Citrus sinensis
orange1.1g011127m.g 5.0kb upstream 5.0kb upstream 8075 true scaffold00001: 274040-282114 Citrus sinensis
orange1.1g011127m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00001: 277115-282114 Citrus sinensis
orange1.1g011127m.g 5.0kb downstream 5.0kb downstream 8075 true scaffold00001: 269040-277114 Citrus sinensis
orange1.1g011127m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00001: 269040-274039 Citrus sinensis
orange1.1g011127m.g 10.0kb upstream 10.0kb upstream 13075 true scaffold00001: 274040-287114 Citrus sinensis
orange1.1g011127m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00001: 277115-287114 Citrus sinensis
orange1.1g011127m.g 10.0kb downstream 10.0kb downstream 13075 true scaffold00001: 264040-277114 Citrus sinensis
orange1.1g011127m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00001: 264040-274039 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340371 5266 SBM View MSA
124254332 5268 Malvidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain