Gene : orange1.1g040158m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10353//PTHR10353:SF44 - GLYCOSYL HYDROLASE Genomic Order:  676
Name:  ? orange1.1g040158m.g Secondary Identifier:  ? PAC:18102272
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5176 Citrus sinensis pathologic  
Csinensis PWY-7089 Citrus sinensis pathologic  
Csinensis PWY-7091 Citrus sinensis pathologic  
Csinensis PWY-7092 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040158m.g 0.5kb upstream 0.5kb upstream 3373 true scaffold00003: 4415861-4419233 Citrus sinensis
orange1.1g040158m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00003: 4418734-4419233 Citrus sinensis
orange1.1g040158m.g 0.5kb downstream 0.5kb downstream 3373 true scaffold00003: 4415361-4418733 Citrus sinensis
orange1.1g040158m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00003: 4415361-4415860 Citrus sinensis
orange1.1g040158m.g 1.0kb upstream 1.0kb upstream 3873 true scaffold00003: 4415861-4419733 Citrus sinensis
orange1.1g040158m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00003: 4418734-4419733 Citrus sinensis
orange1.1g040158m.g 1.0kb downstream 1.0kb downstream 3873 true scaffold00003: 4414861-4418733 Citrus sinensis
orange1.1g040158m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00003: 4414861-4415860 Citrus sinensis
orange1.1g040158m.g 2.0kb upstream 2.0kb upstream 4873 true scaffold00003: 4415861-4420733 Citrus sinensis
orange1.1g040158m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00003: 4418734-4420733 Citrus sinensis
orange1.1g040158m.g 2.0kb downstream 2.0kb downstream 4873 true scaffold00003: 4413861-4418733 Citrus sinensis
orange1.1g040158m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00003: 4413861-4415860 Citrus sinensis
orange1.1g040158m.g 5.0kb upstream 5.0kb upstream 6729 true scaffold00003: 4415861-4422589 Citrus sinensis
orange1.1g040158m.g 5.0kb upstream 5.0kb upstream 3856 false scaffold00003: 4418734-4422589 Citrus sinensis
orange1.1g040158m.g 5.0kb downstream 5.0kb downstream 7873 true scaffold00003: 4410861-4418733 Citrus sinensis
orange1.1g040158m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00003: 4410861-4415860 Citrus sinensis
orange1.1g040158m.g 10.0kb upstream 10.0kb upstream 6729 true scaffold00003: 4415861-4422589 Citrus sinensis
orange1.1g040158m.g 10.0kb upstream 10.0kb upstream 3856 false scaffold00003: 4418734-4422589 Citrus sinensis
orange1.1g040158m.g 10.0kb downstream 10.0kb downstream 12873 true scaffold00003: 4405861-4418733 Citrus sinensis
orange1.1g040158m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00003: 4405861-4415860 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124348622 5266 SBM View MSA
124252389 5268 Malvidae View MSA
124071856 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain