Gene : orange1.1g040627m.g C. sinensis v1.1
Defline:  (1 of 1) KOG0455 - Homoserine dehydrogenase Genomic Order:  360
Name:  ? orange1.1g040627m.g Secondary Identifier:  ? PAC:18102707
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis HOMOSERSYN-PWY Citrus sinensis pathologic  
Csinensis PWY-3001 Citrus sinensis pathologic  
Csinensis PWY-724 Citrus sinensis pathologic  
Csinensis THRESYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g040627m.g 0.5kb upstream 0.5kb upstream 5525 true scaffold00003: 2538816-2544340 Citrus sinensis
orange1.1g040627m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00003: 2538816-2539315 Citrus sinensis
orange1.1g040627m.g 0.5kb downstream 0.5kb downstream 5525 true scaffold00003: 2539316-2544840 Citrus sinensis
orange1.1g040627m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00003: 2544341-2544840 Citrus sinensis
orange1.1g040627m.g 1.0kb upstream 1.0kb upstream 6025 true scaffold00003: 2538316-2544340 Citrus sinensis
orange1.1g040627m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00003: 2538316-2539315 Citrus sinensis
orange1.1g040627m.g 1.0kb downstream 1.0kb downstream 6025 true scaffold00003: 2539316-2545340 Citrus sinensis
orange1.1g040627m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00003: 2544341-2545340 Citrus sinensis
orange1.1g040627m.g 2.0kb upstream 2.0kb upstream 7025 true scaffold00003: 2537316-2544340 Citrus sinensis
orange1.1g040627m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00003: 2537316-2539315 Citrus sinensis
orange1.1g040627m.g 2.0kb downstream 2.0kb downstream 7025 true scaffold00003: 2539316-2546340 Citrus sinensis
orange1.1g040627m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00003: 2544341-2546340 Citrus sinensis
orange1.1g040627m.g 5.0kb upstream 5.0kb upstream 10025 true scaffold00003: 2534316-2544340 Citrus sinensis
orange1.1g040627m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00003: 2534316-2539315 Citrus sinensis
orange1.1g040627m.g 5.0kb downstream 5.0kb downstream 10025 true scaffold00003: 2539316-2549340 Citrus sinensis
orange1.1g040627m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00003: 2544341-2549340 Citrus sinensis
orange1.1g040627m.g 10.0kb upstream 10.0kb upstream 15025 true scaffold00003: 2529316-2544340 Citrus sinensis
orange1.1g040627m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00003: 2529316-2539315 Citrus sinensis
orange1.1g040627m.g 10.0kb downstream 10.0kb downstream 15025 true scaffold00003: 2539316-2554340 Citrus sinensis
orange1.1g040627m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00003: 2544341-2554340 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124336802 5266 SBM View MSA
124242430 5268 Malvidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain