Gene : orange1.1g016270m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12224//PTHR12224:SF2 - BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE Genomic Order:  186
Name:  ? orange1.1g016270m.g Secondary Identifier:  ? PAC:18102539
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7426 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g016270m.g 0.5kb upstream 0.5kb upstream 3767 true scaffold00003: 1309514-1313280 Citrus sinensis
orange1.1g016270m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00003: 1312781-1313280 Citrus sinensis
orange1.1g016270m.g 0.5kb downstream 0.5kb downstream 3767 true scaffold00003: 1309014-1312780 Citrus sinensis
orange1.1g016270m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00003: 1309014-1309513 Citrus sinensis
orange1.1g016270m.g 1.0kb upstream 1.0kb upstream 4267 true scaffold00003: 1309514-1313780 Citrus sinensis
orange1.1g016270m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00003: 1312781-1313780 Citrus sinensis
orange1.1g016270m.g 1.0kb downstream 1.0kb downstream 4267 true scaffold00003: 1308514-1312780 Citrus sinensis
orange1.1g016270m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00003: 1308514-1309513 Citrus sinensis
orange1.1g016270m.g 2.0kb upstream 2.0kb upstream 5267 true scaffold00003: 1309514-1314780 Citrus sinensis
orange1.1g016270m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00003: 1312781-1314780 Citrus sinensis
orange1.1g016270m.g 2.0kb downstream 2.0kb downstream 5267 true scaffold00003: 1307514-1312780 Citrus sinensis
orange1.1g016270m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00003: 1307514-1309513 Citrus sinensis
orange1.1g016270m.g 5.0kb upstream 5.0kb upstream 8267 true scaffold00003: 1309514-1317780 Citrus sinensis
orange1.1g016270m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00003: 1312781-1317780 Citrus sinensis
orange1.1g016270m.g 5.0kb downstream 5.0kb downstream 8267 true scaffold00003: 1304514-1312780 Citrus sinensis
orange1.1g016270m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00003: 1304514-1309513 Citrus sinensis
orange1.1g016270m.g 10.0kb upstream 10.0kb upstream 13267 true scaffold00003: 1309514-1322780 Citrus sinensis
orange1.1g016270m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00003: 1312781-1322780 Citrus sinensis
orange1.1g016270m.g 10.0kb downstream 10.0kb downstream 13267 true scaffold00003: 1299514-1312780 Citrus sinensis
orange1.1g016270m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00003: 1299514-1309513 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342015 5266 SBM View MSA
124239256 5268 Malvidae View MSA
124074833 5270 Rosid View MSA
123745147 5271 Pentapetalae View MSA
122787351 5272 Eudicot View MSA
122044255 5273 Angiosperm View MSA
121351107 5274 Embryophyte View MSA
123424609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain