Gene : orange1.1g041825m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR11452:SF14 - ALPHA-GALACTOSIDASE A Genomic Order:  172
Name:  ? orange1.1g041825m.g Secondary Identifier:  ? PAC:18102552
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY0-1301 Citrus sinensis pathologic  
Csinensis PWY-6527 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g041825m.g 0.5kb upstream 0.5kb upstream 2851 true scaffold00003: 1252511-1255361 Citrus sinensis
orange1.1g041825m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00003: 1252511-1253010 Citrus sinensis
orange1.1g041825m.g 0.5kb downstream 0.5kb downstream 2851 true scaffold00003: 1253011-1255861 Citrus sinensis
orange1.1g041825m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00003: 1255362-1255861 Citrus sinensis
orange1.1g041825m.g 1.0kb upstream 1.0kb upstream 3351 true scaffold00003: 1252011-1255361 Citrus sinensis
orange1.1g041825m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00003: 1252011-1253010 Citrus sinensis
orange1.1g041825m.g 1.0kb downstream 1.0kb downstream 3351 true scaffold00003: 1253011-1256361 Citrus sinensis
orange1.1g041825m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00003: 1255362-1256361 Citrus sinensis
orange1.1g041825m.g 2.0kb upstream 2.0kb upstream 4351 true scaffold00003: 1251011-1255361 Citrus sinensis
orange1.1g041825m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00003: 1251011-1253010 Citrus sinensis
orange1.1g041825m.g 2.0kb downstream 2.0kb downstream 4351 true scaffold00003: 1253011-1257361 Citrus sinensis
orange1.1g041825m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00003: 1255362-1257361 Citrus sinensis
orange1.1g041825m.g 5.0kb upstream 5.0kb upstream 7351 true scaffold00003: 1248011-1255361 Citrus sinensis
orange1.1g041825m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00003: 1248011-1253010 Citrus sinensis
orange1.1g041825m.g 5.0kb downstream 5.0kb downstream 7351 true scaffold00003: 1253011-1260361 Citrus sinensis
orange1.1g041825m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00003: 1255362-1260361 Citrus sinensis
orange1.1g041825m.g 10.0kb upstream 10.0kb upstream 12351 true scaffold00003: 1243011-1255361 Citrus sinensis
orange1.1g041825m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00003: 1243011-1253010 Citrus sinensis
orange1.1g041825m.g 10.0kb downstream 10.0kb downstream 12351 true scaffold00003: 1253011-1265361 Citrus sinensis
orange1.1g041825m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00003: 1255362-1265361 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124349365 5266 SBM View MSA
124247152 5268 Malvidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain