Gene : orange1.1g024422m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21649:SF13 - LHCA2 PROTEIN Genomic Order:  53
Name:  ? orange1.1g024422m.g Secondary Identifier:  ? PAC:18101578
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g024422m.g 0.5kb upstream 0.5kb upstream 2092 true scaffold00003: 404267-406358 Citrus sinensis
orange1.1g024422m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00003: 405859-406358 Citrus sinensis
orange1.1g024422m.g 0.5kb downstream 0.5kb downstream 2092 true scaffold00003: 403767-405858 Citrus sinensis
orange1.1g024422m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00003: 403767-404266 Citrus sinensis
orange1.1g024422m.g 1.0kb upstream 1.0kb upstream 2592 true scaffold00003: 404267-406858 Citrus sinensis
orange1.1g024422m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00003: 405859-406858 Citrus sinensis
orange1.1g024422m.g 1.0kb downstream 1.0kb downstream 2592 true scaffold00003: 403267-405858 Citrus sinensis
orange1.1g024422m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00003: 403267-404266 Citrus sinensis
orange1.1g024422m.g 2.0kb upstream 2.0kb upstream 3592 true scaffold00003: 404267-407858 Citrus sinensis
orange1.1g024422m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00003: 405859-407858 Citrus sinensis
orange1.1g024422m.g 2.0kb downstream 2.0kb downstream 3592 true scaffold00003: 402267-405858 Citrus sinensis
orange1.1g024422m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00003: 402267-404266 Citrus sinensis
orange1.1g024422m.g 5.0kb upstream 5.0kb upstream 6592 true scaffold00003: 404267-410858 Citrus sinensis
orange1.1g024422m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00003: 405859-410858 Citrus sinensis
orange1.1g024422m.g 5.0kb downstream 5.0kb downstream 6592 true scaffold00003: 399267-405858 Citrus sinensis
orange1.1g024422m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00003: 399267-404266 Citrus sinensis
orange1.1g024422m.g 10.0kb upstream 10.0kb upstream 11592 true scaffold00003: 404267-415858 Citrus sinensis
orange1.1g024422m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00003: 405859-415858 Citrus sinensis
orange1.1g024422m.g 10.0kb downstream 10.0kb downstream 11592 true scaffold00003: 394267-405858 Citrus sinensis
orange1.1g024422m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00003: 394267-404266 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341873 5266 SBM View MSA
124241980 5268 Malvidae View MSA
124065144 5270 Rosid View MSA
123742469 5271 Pentapetalae View MSA
122790167 5272 Eudicot View MSA
122046380 5273 Angiosperm View MSA
121344826 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain