Gene : orange1.1g046008m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  516
Name:  ? orange1.1g046008m.g Secondary Identifier:  ? PAC:18092216
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6441 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g046008m.g 0.5kb upstream 0.5kb upstream 6594 true scaffold00002: 3511852-3518445 Citrus sinensis
orange1.1g046008m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00002: 3517946-3518445 Citrus sinensis
orange1.1g046008m.g 0.5kb downstream 0.5kb downstream 6594 true scaffold00002: 3511352-3517945 Citrus sinensis
orange1.1g046008m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00002: 3511352-3511851 Citrus sinensis
orange1.1g046008m.g 1.0kb upstream 1.0kb upstream 7094 true scaffold00002: 3511852-3518945 Citrus sinensis
orange1.1g046008m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00002: 3517946-3518945 Citrus sinensis
orange1.1g046008m.g 1.0kb downstream 1.0kb downstream 7094 true scaffold00002: 3510852-3517945 Citrus sinensis
orange1.1g046008m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00002: 3510852-3511851 Citrus sinensis
orange1.1g046008m.g 2.0kb upstream 2.0kb upstream 8094 true scaffold00002: 3511852-3519945 Citrus sinensis
orange1.1g046008m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00002: 3517946-3519945 Citrus sinensis
orange1.1g046008m.g 2.0kb downstream 2.0kb downstream 8094 true scaffold00002: 3509852-3517945 Citrus sinensis
orange1.1g046008m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00002: 3509852-3511851 Citrus sinensis
orange1.1g046008m.g 5.0kb upstream 5.0kb upstream 11094 true scaffold00002: 3511852-3522945 Citrus sinensis
orange1.1g046008m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00002: 3517946-3522945 Citrus sinensis
orange1.1g046008m.g 5.0kb downstream 5.0kb downstream 11094 true scaffold00002: 3506852-3517945 Citrus sinensis
orange1.1g046008m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00002: 3506852-3511851 Citrus sinensis
orange1.1g046008m.g 10.0kb upstream 10.0kb upstream 16094 true scaffold00002: 3511852-3527945 Citrus sinensis
orange1.1g046008m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00002: 3517946-3527945 Citrus sinensis
orange1.1g046008m.g 10.0kb downstream 10.0kb downstream 16094 true scaffold00002: 3501852-3517945 Citrus sinensis
orange1.1g046008m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00002: 3501852-3511851 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338849 5266 SBM View MSA
124238946 5268 Malvidae View MSA
124062670 5270 Rosid View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain