Gene : orange1.1g013943m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  49
Name:  ? orange1.1g013943m.g Secondary Identifier:  ? PAC:18097066
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWYDQC-4 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g013943m.g 0.5kb upstream 0.5kb upstream 2889 true scaffold00005: 444062-446950 Citrus sinensis
orange1.1g013943m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00005: 444062-444561 Citrus sinensis
orange1.1g013943m.g 0.5kb downstream 0.5kb downstream 2889 true scaffold00005: 444562-447450 Citrus sinensis
orange1.1g013943m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00005: 446951-447450 Citrus sinensis
orange1.1g013943m.g 1.0kb upstream 1.0kb upstream 3389 true scaffold00005: 443562-446950 Citrus sinensis
orange1.1g013943m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00005: 443562-444561 Citrus sinensis
orange1.1g013943m.g 1.0kb downstream 1.0kb downstream 3389 true scaffold00005: 444562-447950 Citrus sinensis
orange1.1g013943m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00005: 446951-447950 Citrus sinensis
orange1.1g013943m.g 2.0kb upstream 2.0kb upstream 4389 true scaffold00005: 442562-446950 Citrus sinensis
orange1.1g013943m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00005: 442562-444561 Citrus sinensis
orange1.1g013943m.g 2.0kb downstream 2.0kb downstream 4389 true scaffold00005: 444562-448950 Citrus sinensis
orange1.1g013943m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00005: 446951-448950 Citrus sinensis
orange1.1g013943m.g 5.0kb upstream 5.0kb upstream 7389 true scaffold00005: 439562-446950 Citrus sinensis
orange1.1g013943m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00005: 439562-444561 Citrus sinensis
orange1.1g013943m.g 5.0kb downstream 5.0kb downstream 7389 true scaffold00005: 444562-451950 Citrus sinensis
orange1.1g013943m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00005: 446951-451950 Citrus sinensis
orange1.1g013943m.g 10.0kb upstream 10.0kb upstream 12389 true scaffold00005: 434562-446950 Citrus sinensis
orange1.1g013943m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00005: 434562-444561 Citrus sinensis
orange1.1g013943m.g 10.0kb downstream 10.0kb downstream 12389 true scaffold00005: 444562-456950 Citrus sinensis
orange1.1g013943m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00005: 446951-456950 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345724 5266 SBM View MSA
124244331 5268 Malvidae View MSA
124069370 5270 Rosid View MSA
123747095 5271 Pentapetalae View MSA
122790040 5272 Eudicot View MSA
122050610 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain