Gene : orange1.1g009857m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  220
Name:  ? orange1.1g009857m.g Secondary Identifier:  ? PAC:18091561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009857m.g 0.5kb upstream 0.5kb upstream 3930 true scaffold00002: 1566789-1570718 Citrus sinensis
orange1.1g009857m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00002: 1566789-1567288 Citrus sinensis
orange1.1g009857m.g 0.5kb downstream 0.5kb downstream 3930 true scaffold00002: 1567289-1571218 Citrus sinensis
orange1.1g009857m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00002: 1570719-1571218 Citrus sinensis
orange1.1g009857m.g 1.0kb upstream 1.0kb upstream 4430 true scaffold00002: 1566289-1570718 Citrus sinensis
orange1.1g009857m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00002: 1566289-1567288 Citrus sinensis
orange1.1g009857m.g 1.0kb downstream 1.0kb downstream 4430 true scaffold00002: 1567289-1571718 Citrus sinensis
orange1.1g009857m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00002: 1570719-1571718 Citrus sinensis
orange1.1g009857m.g 2.0kb upstream 2.0kb upstream 5430 true scaffold00002: 1565289-1570718 Citrus sinensis
orange1.1g009857m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00002: 1565289-1567288 Citrus sinensis
orange1.1g009857m.g 2.0kb downstream 2.0kb downstream 5430 true scaffold00002: 1567289-1572718 Citrus sinensis
orange1.1g009857m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00002: 1570719-1572718 Citrus sinensis
orange1.1g009857m.g 5.0kb upstream 5.0kb upstream 8430 true scaffold00002: 1562289-1570718 Citrus sinensis
orange1.1g009857m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00002: 1562289-1567288 Citrus sinensis
orange1.1g009857m.g 5.0kb downstream 5.0kb downstream 8430 true scaffold00002: 1567289-1575718 Citrus sinensis
orange1.1g009857m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00002: 1570719-1575718 Citrus sinensis
orange1.1g009857m.g 10.0kb upstream 10.0kb upstream 13430 true scaffold00002: 1557289-1570718 Citrus sinensis
orange1.1g009857m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00002: 1557289-1567288 Citrus sinensis
orange1.1g009857m.g 10.0kb downstream 10.0kb downstream 13430 true scaffold00002: 1567289-1580718 Citrus sinensis
orange1.1g009857m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00002: 1570719-1580718 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337965 5266 SBM View MSA
124245103 5268 Malvidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain