Gene : orange1.1g024871m.g C. sinensis v1.1
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  449
Name:  ? orange1.1g024871m.g Secondary Identifier:  ? PAC:18091280
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis ARGSYNBSUB-PWY Citrus sinensis pathologic  
Csinensis ARGSYN-PWY Citrus sinensis pathologic  
Csinensis CITRULBIO-PWY Citrus sinensis pathologic  
Csinensis CITRULLINE-DEG-PWY Citrus sinensis pathologic  
Csinensis PWY-4984 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g024871m.g 0.5kb upstream 0.5kb upstream 3223 true scaffold00002: 3105464-3108686 Citrus sinensis
orange1.1g024871m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00002: 3108187-3108686 Citrus sinensis
orange1.1g024871m.g 0.5kb downstream 0.5kb downstream 3223 true scaffold00002: 3104964-3108186 Citrus sinensis
orange1.1g024871m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00002: 3104964-3105463 Citrus sinensis
orange1.1g024871m.g 1.0kb upstream 1.0kb upstream 3723 true scaffold00002: 3105464-3109186 Citrus sinensis
orange1.1g024871m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00002: 3108187-3109186 Citrus sinensis
orange1.1g024871m.g 1.0kb downstream 1.0kb downstream 3723 true scaffold00002: 3104464-3108186 Citrus sinensis
orange1.1g024871m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00002: 3104464-3105463 Citrus sinensis
orange1.1g024871m.g 2.0kb upstream 2.0kb upstream 4723 true scaffold00002: 3105464-3110186 Citrus sinensis
orange1.1g024871m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00002: 3108187-3110186 Citrus sinensis
orange1.1g024871m.g 2.0kb downstream 2.0kb downstream 4723 true scaffold00002: 3103464-3108186 Citrus sinensis
orange1.1g024871m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00002: 3103464-3105463 Citrus sinensis
orange1.1g024871m.g 5.0kb upstream 5.0kb upstream 7723 true scaffold00002: 3105464-3113186 Citrus sinensis
orange1.1g024871m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00002: 3108187-3113186 Citrus sinensis
orange1.1g024871m.g 5.0kb downstream 5.0kb downstream 7723 true scaffold00002: 3100464-3108186 Citrus sinensis
orange1.1g024871m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00002: 3100464-3105463 Citrus sinensis
orange1.1g024871m.g 10.0kb upstream 10.0kb upstream 12723 true scaffold00002: 3105464-3118186 Citrus sinensis
orange1.1g024871m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00002: 3108187-3118186 Citrus sinensis
orange1.1g024871m.g 10.0kb downstream 10.0kb downstream 12723 true scaffold00002: 3095464-3108186 Citrus sinensis
orange1.1g024871m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00002: 3095464-3105463 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121527527 5273 Angiosperm Singleton cluster - no MSA
124327111 5266 SBM Singleton cluster - no MSA
124172376 5268 Malvidae Singleton cluster - no MSA
123894915 5270 Rosid Singleton cluster - no MSA
123476774 5271 Pentapetalae Singleton cluster - no MSA
122512026 5272 Eudicot Singleton cluster - no MSA
120800289 5274 Embryophyte Singleton cluster - no MSA
122841843 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain