Gene : orange1.1g008275m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10543//PTHR10543:SF30 - BETA-CAROTENE DIOXYGENASE Genomic Order:  93
Name:  ? orange1.1g008275m.g Secondary Identifier:  ? PAC:18096784
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-695 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g008275m.g 0.5kb upstream 0.5kb upstream 4980 true scaffold00005: 779541-784520 Citrus sinensis
orange1.1g008275m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00005: 784021-784520 Citrus sinensis
orange1.1g008275m.g 0.5kb downstream 0.5kb downstream 4980 true scaffold00005: 779041-784020 Citrus sinensis
orange1.1g008275m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00005: 779041-779540 Citrus sinensis
orange1.1g008275m.g 1.0kb upstream 1.0kb upstream 5480 true scaffold00005: 779541-785020 Citrus sinensis
orange1.1g008275m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00005: 784021-785020 Citrus sinensis
orange1.1g008275m.g 1.0kb downstream 1.0kb downstream 5480 true scaffold00005: 778541-784020 Citrus sinensis
orange1.1g008275m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00005: 778541-779540 Citrus sinensis
orange1.1g008275m.g 2.0kb upstream 2.0kb upstream 6480 true scaffold00005: 779541-786020 Citrus sinensis
orange1.1g008275m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00005: 784021-786020 Citrus sinensis
orange1.1g008275m.g 2.0kb downstream 2.0kb downstream 6480 true scaffold00005: 777541-784020 Citrus sinensis
orange1.1g008275m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00005: 777541-779540 Citrus sinensis
orange1.1g008275m.g 5.0kb upstream 5.0kb upstream 9480 true scaffold00005: 779541-789020 Citrus sinensis
orange1.1g008275m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00005: 784021-789020 Citrus sinensis
orange1.1g008275m.g 5.0kb downstream 5.0kb downstream 9480 true scaffold00005: 774541-784020 Citrus sinensis
orange1.1g008275m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00005: 774541-779540 Citrus sinensis
orange1.1g008275m.g 10.0kb upstream 10.0kb upstream 14480 true scaffold00005: 779541-794020 Citrus sinensis
orange1.1g008275m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00005: 784021-794020 Citrus sinensis
orange1.1g008275m.g 10.0kb downstream 10.0kb downstream 14480 true scaffold00005: 769541-784020 Citrus sinensis
orange1.1g008275m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00005: 769541-779540 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124347076 5266 SBM View MSA
124246521 5268 Malvidae View MSA
124074147 5270 Rosid View MSA
123748697 5271 Pentapetalae View MSA
122795171 5272 Eudicot View MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain