Gene : orange1.1g027072m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12606:SF15 - NEDD8-SPECIFIC PROTEASE 1 Genomic Order:  166
Name:  ? orange1.1g027072m.g Secondary Identifier:  ? PAC:18097180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027072m.g 0.5kb upstream 0.5kb upstream 2809 true scaffold00014: 1196079-1198887 Citrus sinensis
orange1.1g027072m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00014: 1196079-1196578 Citrus sinensis
orange1.1g027072m.g 0.5kb downstream 0.5kb downstream 2809 true scaffold00014: 1196579-1199387 Citrus sinensis
orange1.1g027072m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00014: 1198888-1199387 Citrus sinensis
orange1.1g027072m.g 1.0kb upstream 1.0kb upstream 3309 true scaffold00014: 1195579-1198887 Citrus sinensis
orange1.1g027072m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00014: 1195579-1196578 Citrus sinensis
orange1.1g027072m.g 1.0kb downstream 1.0kb downstream 3309 true scaffold00014: 1196579-1199887 Citrus sinensis
orange1.1g027072m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00014: 1198888-1199887 Citrus sinensis
orange1.1g027072m.g 2.0kb upstream 2.0kb upstream 4309 true scaffold00014: 1194579-1198887 Citrus sinensis
orange1.1g027072m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00014: 1194579-1196578 Citrus sinensis
orange1.1g027072m.g 2.0kb downstream 2.0kb downstream 4309 true scaffold00014: 1196579-1200887 Citrus sinensis
orange1.1g027072m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00014: 1198888-1200887 Citrus sinensis
orange1.1g027072m.g 5.0kb upstream 5.0kb upstream 7309 true scaffold00014: 1191579-1198887 Citrus sinensis
orange1.1g027072m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00014: 1191579-1196578 Citrus sinensis
orange1.1g027072m.g 5.0kb downstream 5.0kb downstream 7309 true scaffold00014: 1196579-1203887 Citrus sinensis
orange1.1g027072m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00014: 1198888-1203887 Citrus sinensis
orange1.1g027072m.g 10.0kb upstream 10.0kb upstream 12309 true scaffold00014: 1186579-1198887 Citrus sinensis
orange1.1g027072m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00014: 1186579-1196578 Citrus sinensis
orange1.1g027072m.g 10.0kb downstream 10.0kb downstream 12309 true scaffold00014: 1196579-1208887 Citrus sinensis
orange1.1g027072m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00014: 1198888-1208887 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342759 5266 SBM View MSA
124246104 5268 Malvidae View MSA
124065120 5270 Rosid View MSA
123744954 5271 Pentapetalae View MSA
122791121 5272 Eudicot View MSA
122044999 5273 Angiosperm View MSA
121348987 5274 Embryophyte View MSA
123428480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain