Gene : orange1.1g048784m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR21022:SF1 - AROGENATE DEHYDRATASE/PREPHENATE DEHYDRATASE 2, CHLOROPLASTIC Genomic Order:  167
Name:  ? orange1.1g048784m.g Secondary Identifier:  ? PAC:18097365
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-3462 Citrus sinensis pathologic  
Csinensis PWY-3481 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g048784m.g 0.5kb upstream 0.5kb upstream 2628 true scaffold00014: 1201116-1203743 Citrus sinensis
orange1.1g048784m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00014: 1203244-1203743 Citrus sinensis
orange1.1g048784m.g 0.5kb downstream 0.5kb downstream 2628 true scaffold00014: 1200616-1203243 Citrus sinensis
orange1.1g048784m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00014: 1200616-1201115 Citrus sinensis
orange1.1g048784m.g 1.0kb upstream 1.0kb upstream 3128 true scaffold00014: 1201116-1204243 Citrus sinensis
orange1.1g048784m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00014: 1203244-1204243 Citrus sinensis
orange1.1g048784m.g 1.0kb downstream 1.0kb downstream 3128 true scaffold00014: 1200116-1203243 Citrus sinensis
orange1.1g048784m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00014: 1200116-1201115 Citrus sinensis
orange1.1g048784m.g 2.0kb upstream 2.0kb upstream 4128 true scaffold00014: 1201116-1205243 Citrus sinensis
orange1.1g048784m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00014: 1203244-1205243 Citrus sinensis
orange1.1g048784m.g 2.0kb downstream 2.0kb downstream 4128 true scaffold00014: 1199116-1203243 Citrus sinensis
orange1.1g048784m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00014: 1199116-1201115 Citrus sinensis
orange1.1g048784m.g 5.0kb upstream 5.0kb upstream 7128 true scaffold00014: 1201116-1208243 Citrus sinensis
orange1.1g048784m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00014: 1203244-1208243 Citrus sinensis
orange1.1g048784m.g 5.0kb downstream 5.0kb downstream 7128 true scaffold00014: 1196116-1203243 Citrus sinensis
orange1.1g048784m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00014: 1196116-1201115 Citrus sinensis
orange1.1g048784m.g 10.0kb upstream 10.0kb upstream 12128 true scaffold00014: 1201116-1213243 Citrus sinensis
orange1.1g048784m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00014: 1203244-1213243 Citrus sinensis
orange1.1g048784m.g 10.0kb downstream 10.0kb downstream 12128 true scaffold00014: 1191116-1203243 Citrus sinensis
orange1.1g048784m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00014: 1191116-1201115 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040982 5273 Angiosperm View MSA
124345019 5266 SBM View MSA
124237918 5268 Malvidae View MSA
124068045 5270 Rosid View MSA
123737852 5271 Pentapetalae View MSA
122798804 5272 Eudicot View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain