Gene : orange1.1g043831m.g C. sinensis v1.1
Defline:  (1 of 1) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  172
Name:  ? orange1.1g043831m.g Secondary Identifier:  ? PAC:18097257
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-6689 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g043831m.g 0.5kb upstream 0.5kb upstream 1233 true scaffold00014: 1245247-1246479 Citrus sinensis
orange1.1g043831m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00014: 1245980-1246479 Citrus sinensis
orange1.1g043831m.g 0.5kb downstream 0.5kb downstream 1233 true scaffold00014: 1244747-1245979 Citrus sinensis
orange1.1g043831m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00014: 1244747-1245246 Citrus sinensis
orange1.1g043831m.g 1.0kb upstream 1.0kb upstream 1733 true scaffold00014: 1245247-1246979 Citrus sinensis
orange1.1g043831m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00014: 1245980-1246979 Citrus sinensis
orange1.1g043831m.g 1.0kb downstream 1.0kb downstream 1733 true scaffold00014: 1244247-1245979 Citrus sinensis
orange1.1g043831m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00014: 1244247-1245246 Citrus sinensis
orange1.1g043831m.g 2.0kb upstream 2.0kb upstream 2733 true scaffold00014: 1245247-1247979 Citrus sinensis
orange1.1g043831m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00014: 1245980-1247979 Citrus sinensis
orange1.1g043831m.g 2.0kb downstream 2.0kb downstream 2733 true scaffold00014: 1243247-1245979 Citrus sinensis
orange1.1g043831m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00014: 1243247-1245246 Citrus sinensis
orange1.1g043831m.g 5.0kb upstream 5.0kb upstream 5733 true scaffold00014: 1245247-1250979 Citrus sinensis
orange1.1g043831m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00014: 1245980-1250979 Citrus sinensis
orange1.1g043831m.g 5.0kb downstream 5.0kb downstream 5733 true scaffold00014: 1240247-1245979 Citrus sinensis
orange1.1g043831m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00014: 1240247-1245246 Citrus sinensis
orange1.1g043831m.g 10.0kb upstream 10.0kb upstream 10733 true scaffold00014: 1245247-1255979 Citrus sinensis
orange1.1g043831m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00014: 1245980-1255979 Citrus sinensis
orange1.1g043831m.g 10.0kb downstream 10.0kb downstream 10733 true scaffold00014: 1235247-1245979 Citrus sinensis
orange1.1g043831m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00014: 1235247-1245246 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
124346911 5266 SBM View MSA
124240586 5268 Malvidae View MSA
124064519 5270 Rosid View MSA
123739625 5271 Pentapetalae View MSA
122788641 5272 Eudicot View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain